RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RPA2P15927 270 aa17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 PYDC2Q56P42 97 aa17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 CCDC190Q86UF4 302 aa17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 OR13C8Q8NGS7 320 aa17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 ZFAND1Q8TCF1 268 aa17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 FYTTD1Q96QD9 318 aaKnown RBP17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 ALX4Q9H161 411 aaPredicted RBP17.18■□□□□ 0.34
SMARCD2-206ENST00000577990 C13orf42A0A1B0GVH6 325 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 DPPA5A6NC42 116 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 HMX3A6NHT5 357 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 OR8U8P0C7N1 319 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 MYOD1P15172 320 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 ECI1P42126 302 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 PIGPP57054 158 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 ZNF616Q08AN1 781 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 SLC25A42Q86VD7 318 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 TTC9CQ8N5M4 171 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 MARCH1Q8TCQ1 289 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 DPF1Q92782 380 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 MRGPRFQ96AM1 343 aa17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 THAP7Q9BT49 309 aaPredicted RBP17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 MCRIP2Q9BUT9 160 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-206ENST00000577990 A0A0G2JLM5 398 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 A0A1B0GW64 132 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 E7EUB6 86 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 KRASP01116 189 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 FGF2P09038 288 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 PTBP1P26599 531 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 G6PCP35575 357 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 ZNF79Q15937 498 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 FOXB2Q5VYV0 432 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 CADM3Q8N126 398 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 PRRT1Q99946 306 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 GPR61Q9BZJ8 451 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 COPZ2Q9P299 210 aa17.16■□□□□ 0.34
SMARCD2-206ENST00000577990 CTSDP07339 412 aaPredicted RBP17.15■□□□□ 0.34
SMARCD2-206ENST00000577990 Q8N402 240 aa17.15■□□□□ 0.34
SMARCD2-206ENST00000577990 CCDC71LQ8N9Z2 235 aa17.15■□□□□ 0.34
SMARCD2-206ENST00000577990 OR6Q1Q8NGQ2 317 aa17.15■□□□□ 0.34
SMARCD2-206ENST00000577990 COMMD5Q9GZQ3 224 aa17.15■□□□□ 0.34
SMARCD2-206ENST00000577990 ZNF257Q9Y2Q1 563 aa17.15■□□□□ 0.34
SMARCD2-206ENST00000577990 NPIPB5A8MRT5 1133 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 LINC01619G3V211 115 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 H0Y980 276 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 SERPINE2P07093 398 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 ETV6P41212 452 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 OR2B8PP59922 312 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 DEFA5Q01523 94 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 SURF2Q15527 256 aaPredicted RBP17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 SPANXN2Q5MJ10 180 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 OR51S1Q8NGJ8 323 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 TRIM63Q969Q1 353 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 USMG5Q96IX5 58 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 SLC2A8Q9NY64 477 aa17.14■□□□□ 0.33
SMARCD2-206ENST00000577990 IGHV4OR15-8A0A075B7B6 117 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 A0A087WW49 117 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 CGB1A6NKQ9 187 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 IGKV1-39P01597 117 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 PRH1P02810 166 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 IGKV1D-39P04432 117 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 HSPB1P04792 205 aaKnown RBP17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 AREGP15514 252 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 ZNF45Q02386 682 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 SCP2D1Q9UJQ7 156 aa17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 C14orf166Q9Y224 244 aaKnown RBP17.13■□□□□ 0.33
SMARCD2-206ENST00000577990 C3orf85A0A1B0GTC6 90 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 FAM223BA6NKX1 122 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 RBMXL2O75526 392 aaKnown RBP17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 SNAPC5O75971 98 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 RHOGP84095 191 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 KLF9Q13886 244 aaPredicted RBP17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 FAM223AQ8IWN6 122 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 SEC22AQ96IW7 307 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 TP53RKQ96S44 253 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 TSC22D3Q99576 134 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 QTRT1Q9BXR0 403 aaKnown RBP17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 MCUBQ9NWR8 336 aa17.12■□□□□ 0.33
SMARCD2-206ENST00000577990 TRBV9A0A0B4J1U6 114 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 CRYGCP07315 174 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 PSMB6P28072 239 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 FAUP35544 74 aaKnown RBP17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 SLURP1P55000 103 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 AP3S2P59780 193 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 THOC7Q6I9Y2 204 aaKnown RBP17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 TOMM5Q8N4H5 51 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 SRSF8Q9BRL6 282 aaKnown RBP17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 RTBDNQ9BSG5 229 aaPredicted RBP17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 C5orf66Q9H5L9 145 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 AKIP1Q9NQ31 210 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 PRNDQ9UKY0 176 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 NSG2Q9Y328 171 aa17.11■□□□□ 0.33
SMARCD2-206ENST00000577990 IGLC7A0M8Q6 106 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 CTRB1P17538 263 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 CTRB2Q6GPI1 263 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 C19orf35Q6ZS72 473 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 H2BFWTQ7Z2G1 175 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 NECAP1Q8NC96 275 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 OR1L8Q8NGR8 309 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 DCUN1D4Q92564 292 aa17.1■□□□□ 0.33
SMARCD2-206ENST00000577990 SRRQ9GZT4 340 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms