RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 HARBI1Q96MB7 349 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 SLC25A22Q9H936 323 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 A0A1W2PPR1 153 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 ZFP92A6NM28 416 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 CEBPGP53567 150 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 OR9G1Q8NH87 305 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 TMEM133Q9H2Q1 129 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 CBLN4Q9NTU7 201 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 PRNDQ9UKY0 176 aa15.53■□□□□ 0.08
SMPD3-203ENST00000563226 IFNA4P05014 189 aa15.52■□□□□ 0.08
SMPD3-203ENST00000563226 SOHLH1Q5JUK2 328 aa15.52■□□□□ 0.08
SMPD3-203ENST00000563226 CYB561D1Q8N8Q1 229 aa15.52■□□□□ 0.08
SMPD3-203ENST00000563226 SLC24A4Q8NFF2 622 aa15.52■□□□□ 0.08
SMPD3-203ENST00000563226 OSR1Q8TAX0 266 aaPredicted RBP15.52■□□□□ 0.08
SMPD3-203ENST00000563226 TMEM186Q96B77 213 aa15.52■□□□□ 0.08
SMPD3-203ENST00000563226 BET1LQ9NYM9 111 aa15.52■□□□□ 0.08
SMPD3-203ENST00000563226 KBTBD11O94819 623 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 CA2P00918 260 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 HSPB1P04792 205 aaKnown RBP15.52■□□□□ 0.07
SMPD3-203ENST00000563226 SNRNP70P08621 437 aaKnown RBP15.52■□□□□ 0.07
SMPD3-203ENST00000563226 NPY1RP25929 384 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 TREML4Q6UXN2 200 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 OR10G4Q8NGN3 311 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 OR10G9Q8NGN4 311 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 OR10G7Q8NGN6 311 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 C17orf50Q8WW18 174 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 RAB1BQ9H0U4 201 aa15.52■□□□□ 0.07
SMPD3-203ENST00000563226 TEX50A0A1B0GTY4 177 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 M0R036 132 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 ZNF137PP52743 207 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 PRCDQ00LT1 54 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 TMEM177Q53S58 311 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 KHDC3LQ587J8 217 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 FAM71F2Q6NXP2 309 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 ZNF709Q8N972 641 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 C1orf159Q96HA4 380 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 ENY2Q9NPA8 101 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 SLC39A9Q9NUM3 307 aa15.51■□□□□ 0.07
SMPD3-203ENST00000563226 FSTL3O95633 263 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 BCL2P10415 239 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 GNLYP22749 145 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 RAB11AP62491 216 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 GCSAMLQ5JQS6 135 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 FAM122CQ6P4D5 195 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 LHX4Q969G2 390 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 RPS10P5Q9NQ39 176 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 ZNF257Q9Y2Q1 563 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 PUS1Q9Y606 427 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMPD3-203ENST00000563226 TACC2O95359 2948 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 C7orf77A4D0Y5 90 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 DLK1P80370 383 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 ARSJQ5FYB0 599 aaPredicted RBP15.5■□□□□ 0.07
SMPD3-203ENST00000563226 TGIF2LXQ8IUE1 241 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 FLYWCH2Q96CP2 140 aaKnown RBP15.5■□□□□ 0.07
SMPD3-203ENST00000563226 MGST2Q99735 147 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 TMPRSS5Q9H3S3 457 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 PLEKHA3Q9HB20 300 aa15.5■□□□□ 0.07
SMPD3-203ENST00000563226 ARHGAP32A7KAX9 2087 aa15.49■□□□□ 0.07
SMPD3-203ENST00000563226 IGHV2-26A0A0B4J1V2 119 aa15.49■□□□□ 0.07
SMPD3-203ENST00000563226 C17orf112F2Z3M2 114 aa15.49■□□□□ 0.07
SMPD3-203ENST00000563226 WDR25Q64LD2 544 aaPredicted RBP15.49■□□□□ 0.07
SMPD3-203ENST00000563226 ITLN2Q8WWU7 325 aaPredicted RBP15.49■□□□□ 0.07
SMPD3-203ENST00000563226 GGACTQ9BVM4 153 aa15.49■□□□□ 0.07
SMPD3-203ENST00000563226 CTXND1A0A1B0GTU2 59 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 MBP02144 154 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 PDPNQ86YL7 162 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 OR10W1Q8NGF6 305 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 RITA1Q96K30 269 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 IGHV3-72A0A0B4J1Y9 119 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 PPIAL4CA0A0B4J2A2 164 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 IGLV2-23P01705 113 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 PPIAL4GP0DN37 164 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 OR8B3Q8NGG8 313 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 OR4C13Q8NGP0 309 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 OR8B2Q96RD0 313 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 WASHC3Q9Y3C0 194 aa15.48■□□□□ 0.07
SMPD3-203ENST00000563226 E7EUB6 86 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 C4orf17Q53FE4 359 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 RAB24Q969Q5 203 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 NEIL1Q96FI4 390 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-203ENST00000563226 GGTLC1Q9BX51 225 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 C22orf46C9J442 243 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 YIF1AO95070 293 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 IGLV1-47P01700 117 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 FAM122AQ96E09 287 aa15.47■□□□□ 0.07
SMPD3-203ENST00000563226 ACTR3CQ9C0K3 210 aaPredicted RBP15.47■□□□□ 0.07
SMPD3-203ENST00000563226 H3BQ15 152 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 C19orf84I3L1E1 186 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 COX7A1P24310 79 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 RPL8P62917 257 aaKnown RBP15.46■□□□□ 0.07
SMPD3-203ENST00000563226 HLA-DRB5Q30154 266 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 MIC13Q5XKP0 118 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 DTX2Q86UW9 622 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 OR5B3Q8NH48 314 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 C8orf46Q8TAG6 207 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 GATAD1Q8WUU5 269 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 SMCO4Q9NRQ5 59 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 TPSG1Q9NRR2 321 aa15.46■□□□□ 0.07
SMPD3-203ENST00000563226 LSM4Q9Y4Z0 139 aaKnown RBP15.46■□□□□ 0.07
SMPD3-203ENST00000563226 MPDU1O75352 247 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms