RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 UCP3P55916 312 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 SSBP1Q04837 148 aaKnown RBP12.45□□□□□ -0.42
COMMD4-206ENST00000562610 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 STEAP1BQ6NZ63 245 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 COMMD5Q9GZQ3 224 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 SLC2A9Q9NRM0 540 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 RSL24D1Q9UHA3 163 aaKnown RBP12.45□□□□□ -0.42
COMMD4-206ENST00000562610 ZNF257Q9Y2Q1 563 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 UPK2O00526 184 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 KRASP01116 189 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 IL6RP08887 468 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-206ENST00000562610 G6PCP35575 357 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 RHOGP84095 191 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 ZNF45Q02386 682 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 EXOSC2Q13868 293 aaKnown RBP12.44□□□□□ -0.42
COMMD4-206ENST00000562610 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 LHFPL1Q86WI0 220 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-206ENST00000562610 USMG5Q96IX5 58 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 RBM38Q9H0Z9 239 aaKnown RBP12.44□□□□□ -0.42
COMMD4-206ENST00000562610 RANGRFQ9HD47 186 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-206ENST00000562610 AKIP1Q9NQ31 210 aa12.44□□□□□ -0.42
COMMD4-206ENST00000562610 A0A1B0GW64 132 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 CTDSPLO15194 276 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 SAP30O75446 220 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 RBMXL2O75526 392 aaKnown RBP12.43□□□□□ -0.42
COMMD4-206ENST00000562610 OR2J3O76001 311 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 CD74P04233 296 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 REG1AP05451 166 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 AREGP15514 252 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 PI3P19957 117 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 TNFSF8P32971 234 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 MEF2DQ14814 521 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 ZNF585BQ52M93 769 aa12.43□□□□□ -0.42
COMMD4-206ENST00000562610 ZNF486Q96H40 463 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-206ENST00000562610 NXF2Q9GZY0 626 aaKnown RBP12.43□□□□□ -0.42
COMMD4-206ENST00000562610 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 FABP12A6NFH5 140 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 DHFRP00374 187 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 ZP3P21754 424 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 PSMB6P28072 239 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 PIGPP57054 158 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 OR2B8PP59922 312 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 ATP5G2Q06055 141 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
COMMD4-206ENST00000562610 PEF1Q9UBV8 284 aaKnown RBP12.42□□□□□ -0.42
COMMD4-206ENST00000562610 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
COMMD4-206ENST00000562610 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 CGB1A6NKQ9 187 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 DISC1C4P0D8 188 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 K7EIL1 84 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 SNAPC5O75971 98 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 AKAIN1P0CW23 69 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 DEFA4P12838 97 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 S100A5P33763 92 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 ECI1P42126 302 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 C15orf32Q32M92 178 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 OR4C16Q8NGL9 310 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 OR13C8Q8NGS7 320 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 TERB2Q8NHR7 220 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 MARCH1Q8TCQ1 289 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 HINT2Q9BX68 163 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 QTRT1Q9BXR0 403 aaKnown RBP12.41□□□□□ -0.42
COMMD4-206ENST00000562610 FAM212BQ9NTI7 297 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-206ENST00000562610 COPZ2Q9P299 210 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 NSG2Q9Y328 171 aa12.41□□□□□ -0.42
COMMD4-206ENST00000562610 GSTZ1O43708 216 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-206ENST00000562610 SERPINE2P07093 398 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 FGF2P09038 288 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 INSL3P51460 131 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 RND3P61587 244 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 CCDC71LQ8N9Z2 235 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 ZFAND1Q8TCF1 268 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 MRGPRFQ96AM1 343 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 FBXL7Q9UJT9 491 aa12.4□□□□□ -0.42
COMMD4-206ENST00000562610 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 H0Y980 276 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 ZNF701M0R085 212 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-206ENST00000562610 CRYGCP07315 174 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 TRAPPC2P0DI81 140 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 TRAPPC2BP0DI82 140 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 CTRB1P17538 263 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 RPEL1Q2QD12 228 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 CTRB2Q6GPI1 263 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
COMMD4-206ENST00000562610 ACSM6Q6P461 480 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 ZNF429Q86V71 674 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 OR10W1Q8NGF6 305 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 C14orf166Q9Y224 244 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms