RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PINX1Q96BK5 328 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RITA1Q96K30 269 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HARBI1Q96MB7 349 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CCL19Q99731 98 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RNF5Q99942 180 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PSMG3Q9BT73 122 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 GGACTQ9BVM4 153 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SCRT1Q9BWW7 348 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BPESC1Q9GZL8 116 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SIRPDQ9H106 197 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 NARFLQ9H6Q4 476 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 NDUFA4L2Q9NRX3 87 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ONECUT1Q9UBC0 465 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 NUP50Q9UKX7 468 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 AMMECR1Q9Y4X0 333 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR51B2Q9Y5P1 312 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 KPTNQ9Y664 436 aa4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.4-201ENST00000516969 POLQO75417 2590 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IGHV2-70DA0A0C4DH43 119 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 A0A1W2PPI3 338 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 E7EUB6 86 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TEX46H3BTG2 121 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 I3L521 148 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 NDUFS8O00217 210 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RRHO14718 337 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IFNA10P01566 189 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CD5P06127 495 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MYOD1P15172 320 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 COX7A1P24310 79 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HTR1DP28221 377 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CD1BP29016 333 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FHITP49789 147 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 F2RL1P55085 397 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RPL8P62917 257 aaKnown RBP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SERF2P84101 59 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RUNX1Q01196 453 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BSXQ3C1V8 233 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TOR2AQ5JU69 321 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TPTE2P1Q5T6R2 138 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR8G2PQ6IF36 304 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM182Q6ZP80 229 aaPredicted RBP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 Q6ZRG5 221 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MOB3BQ86TA1 216 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 LILRB2Q8N423 598 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 COMMD1Q8N668 190 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VSTM2AQ8TAG5 236 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SCGB1C1Q8TD33 95 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 C10orf105Q8TEF2 133 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TAF15Q92804 592 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CLCC1Q96S66 551 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 WDR61Q9GZS3 305 aaKnown RBP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MS4A7Q9GZW8 240 aaPredicted RBP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HRH4Q9H3N8 390 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HEYLQ9NQ87 328 aaPredicted RBP4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 UQCC1Q9NVA1 299 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DPM3Q9P2X0 92 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TIMM9Q9Y5J7 89 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 INSIG2Q9Y5U4 225 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ABCA12Q86UK0 2595 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VPS13CQ709C8 3753 aa4.37□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HELZ2Q9BYK8 2649 aaKnown RBP4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 IGHV3-72A0A0B4J1Y9 119 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 A0A1B0GW64 132 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CGB1A6NKQ9 187 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 OOSP1A8MZH6 123 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 KRBOX1C9JBD0 128 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FNDC10F2Z333 226 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RNASEK-C17orf49H0YIS7 233 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FOXH1O75593 365 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 COX6B1P14854 86 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HOXB4P17483 251 aaPredicted RBP4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ZP3P21754 424 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MAS1LP35410 378 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SNCAP37840 140 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CEACAM3P40198 252 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CAMLGP49069 296 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HOXA1P49639 335 aaPredicted RBP4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 LCN2P80188 198 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 DLK1P80370 383 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SRSF3P84103 164 aaKnown RBP4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PAX8Q06710 450 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TUSC1Q2TAM9 212 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VMA21Q3ZAQ7 101 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 C2orf83Q53S99 150 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 C10orf91Q5T1B1 145 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MINOS1Q5TGZ0 78 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 PVRIGQ6DKI7 326 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SPSB3Q6PJ21 355 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 ETV3LQ6ZN32 361 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VMO1Q7Z5L0 202 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 BPIFCQ8NFQ6 507 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CFHR4Q92496 578 aa4.36□□□□□ -1.71
SCARNA20.4-201ENST00000516969 FAM168AQ92567 244 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms