RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TNFSF10P50591 281 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 PEAR1Q5VY43 1037 aaPredicted RBP13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 LINC01560Q8TB33 94 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 TCTAP57738 103 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 OR10S1Q8NGN2 331 aa13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 MRPL13Q9BYD1 178 aaKnown RBP13.98□□□□□ -0.17
PCDHA1-203ENST00000504120 A0A0B4J293 547 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 KBTBD11-OT1A0A1B0GTJ5 212 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 H3BTX0 84 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 HERPUD1Q15011 391 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 LY6EQ16553 131 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 NEU1Q99519 415 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 GPR61Q9BZJ8 451 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 IQCF6A8MYZ5 107 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 GPX4P36969 197 aaPredicted RBP13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 MEF2CQ06413 473 aaPredicted RBP13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 LOC102723996A0A087X1L8 192 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 K7ERU9 68 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 MOSP00540 346 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 UMODP07911 640 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 COX6CP09669 75 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 PSG7Q13046 419 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 OR13A1Q8NGR1 328 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 FBLN5Q9UBX5 448 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 CARHSP1Q9Y2V2 147 aaKnown RBP13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 PQLC2LA1A4F0 135 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 HLA-DRB1P01911 266 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 RTN4RQ9BZR6 473 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
PCDHA1-203ENST00000504120 C17orf98A8MV24 154 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 EFNB1P98172 346 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 OR4A47Q6IF82 309 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 SLC25A34Q6PIV7 304 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 ERASQ7Z444 233 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 FAM57AQ8TBR7 257 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 MYOFQ9NZM1 2061 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 IGHV1-2P23083 117 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 RTN4RL2Q86UN3 420 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 FLVCR1-AS1Q8TAF5 88 aa13.96□□□□□ -0.17
PCDHA1-203ENST00000504120 CCDC88CQ9P219 2028 aa13.96□□□□□ -0.18
PCDHA1-203ENST00000504120 SIP14410 1827 aa13.96□□□□□ -0.18
PCDHA1-203ENST00000504120 IGLV3-32A0A0A0MS00 114 aa13.96□□□□□ -0.18
PCDHA1-203ENST00000504120 IGHV3-48P01763 117 aa13.96□□□□□ -0.18
PCDHA1-203ENST00000504120 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.18
PCDHA1-203ENST00000504120 HBBP68871 147 aa13.96□□□□□ -0.18
PCDHA1-203ENST00000504120 ZNF837Q96EG3 531 aaPredicted RBP13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 SGK494Q96LW2 274 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 GPR82Q96P67 336 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 PROB1E7EW31 1015 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 KIAA1644Q3SXP7 199 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 CLDND2Q8NHS1 167 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 NEU4Q8WWR8 484 aaPredicted RBP13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 WDYHV1Q96HA8 205 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 CCL19Q99731 98 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 SIAH2O43255 324 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 FABP2P12104 132 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 LCN2P80188 198 aa13.95□□□□□ -0.18
PCDHA1-203ENST00000504120 TCF21O43680 179 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 CEACAM1P13688 526 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 SNRPD3P62318 126 aaKnown RBP13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 FAM216BQ8N7L0 139 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 GAGE10A6NGK3 116 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 LYPD3O95274 346 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 NBEAP1P0C6P0 100 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 DDTP30046 118 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 ZNF646O15015 1829 aaPredicted RBP13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 SBF1O95248 1867 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 IGKV3D-15A0A087WSY6 115 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 IGKV3-15P01624 115 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 DLX6P56179 175 aa13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 MBNL2Q5VZF2 373 aaKnown RBP13.94□□□□□ -0.18
PCDHA1-203ENST00000504120 CCL1P22362 96 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 LHX2P50458 406 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 SSBP3Q9BWW4 388 aaPredicted RBP13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 LINC00312Q9Y6C7 94 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 IGHV3OR16-12A0A075B7B8 117 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 RNF222A6NCQ9 220 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 EGR1P18146 543 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 UQCRFS1P47985 274 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 BSPH1Q075Z2 132 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 DNLZQ5SXM8 178 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 TRBV6-7A0A0A0MS04 114 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 ICAM4Q14773 271 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 WBP1Q96G27 269 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 DUX5Q96PT3 197 aa13.93□□□□□ -0.18
PCDHA1-203ENST00000504120 GRIFINA4D1Z8 144 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 IGFBP2P18065 325 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 ZNF362Q5T0B9 420 aaPredicted RBP13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 FBXL15Q9H469 300 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 TFF3Q07654 80 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 ADIPOQQ15848 244 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 NR2C2APQ86WQ0 139 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 TMEM183AQ8IXX5 376 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 KIR2DL4Q99706 377 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 ZNF256Q9Y2P7 627 aaPredicted RBP13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 APC2O95996 2303 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 AHCTF1Q8WYP5 2266 aa13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 RBFOX2O43251 390 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHA1-203ENST00000504120 NPIPB7O75200 414 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms