RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 SMIM4Q8WVI0 70 aa12.9□□□□□ -0.34
ABCF3-218ENST00000498136 DLX4Q92988 240 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-218ENST00000498136 USMG5Q96IX5 58 aa12.9□□□□□ -0.34
ABCF3-218ENST00000498136 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
ABCF3-218ENST00000498136 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
ABCF3-218ENST00000498136 TRAV3A0A0B4J244 114 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 FABP12A6NFH5 140 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 E7EUB6 86 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 CTDSPLO15194 276 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 BRI3O95415 125 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF735P0CB33 412 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 TNFSF8P32971 234 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 G6PCP35575 357 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 RHOGP84095 191 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 FAAP20Q6NZ36 180 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 RANGRFQ9HD47 186 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-218ENST00000498136 SLC2A9Q9NRM0 540 aa12.89□□□□□ -0.35
ABCF3-218ENST00000498136 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
ABCF3-218ENST00000498136 FAM223BA6NKX1 122 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 CD74P04233 296 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 REG1AP05451 166 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 PI3P19957 117 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 MEF2DQ14814 521 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 LHFPL1Q86WI0 220 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 FAM223AQ8IWN6 122 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 TERB2Q8NHR7 220 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF486Q96H40 463 aaPredicted RBP12.88□□□□□ -0.35
ABCF3-218ENST00000498136 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
ABCF3-218ENST00000498136 AKIP1Q9NQ31 210 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF257Q9Y2Q1 563 aa12.88□□□□□ -0.35
ABCF3-218ENST00000498136 NPIPB5A8MRT5 1133 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 DISC1C4P0D8 188 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 SAP30O75446 220 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 RBMXL2O75526 392 aaKnown RBP12.87□□□□□ -0.35
ABCF3-218ENST00000498136 SNAPC5O75971 98 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 OR2J3O76001 311 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 DHFRP00374 187 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 AKAIN1P0CW23 69 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 DEFA4P12838 97 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 AREGP15514 252 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 ZP3P21754 424 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 S100A5P33763 92 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 PIGPP57054 158 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF45Q02386 682 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 EXOSC2Q13868 293 aaKnown RBP12.87□□□□□ -0.35
ABCF3-218ENST00000498136 C19orf35Q6ZS72 473 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 ZFAND1Q8TCF1 268 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 RBM38Q9H0Z9 239 aaKnown RBP12.87□□□□□ -0.35
ABCF3-218ENST00000498136 COPZ2Q9P299 210 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 PEF1Q9UBV8 284 aaKnown RBP12.87□□□□□ -0.35
ABCF3-218ENST00000498136 NSG2Q9Y328 171 aa12.87□□□□□ -0.35
ABCF3-218ENST00000498136 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 A0A1B0GW64 132 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 SERPINE2P07093 398 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 PSMB6P28072 239 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 ECI1P42126 302 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 INSL3P51460 131 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 OR2B8PP59922 312 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 CCDC71LQ8N9Z2 235 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 NECAP1Q8NC96 275 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 MARCH1Q8TCQ1 289 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 HINT2Q9BX68 163 aa12.86□□□□□ -0.35
ABCF3-218ENST00000498136 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
ABCF3-218ENST00000498136 FAM212BQ9NTI7 297 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-218ENST00000498136 WI2-2373I1.2A0A1W2PRP0 233 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 CGB1A6NKQ9 187 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-218ENST00000498136 RND3P61587 244 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 C15orf32Q32M92 178 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 OR4C16Q8NGL9 310 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 OR1L8Q8NGR8 309 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 OR13C8Q8NGS7 320 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 TSC22D3Q99576 134 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 FBXL7Q9UJT9 491 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 C14orf166Q9Y224 244 aaKnown RBP12.85□□□□□ -0.35
ABCF3-218ENST00000498136 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
ABCF3-218ENST00000498136 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 K7EIL1 84 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF701M0R085 212 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-218ENST00000498136 LY86O95711 162 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 FGF2P09038 288 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 TRAPPC2P0DI81 140 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 TRAPPC2BP0DI82 140 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 CTRB1P17538 263 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 PYDC2Q56P42 97 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 ACSM6Q6P461 480 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 H2BFWTQ7Z2G1 175 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 ZNF429Q86V71 674 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 MRGPRFQ96AM1 343 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms