RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TNCP24821 2201 aa5.4□□□□□ -1.55
TOP3A-207ENST00000493648 IGHV4OR15-8A0A075B7B6 117 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 A0A087WW49 117 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ANKRD34BA5PLL1 514 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 HMX3A6NHT5 357 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 FAM223BA6NKX1 122 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 CTDSPLO15194 276 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 SNAPC5O75971 98 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 S1PR2O95136 353 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 RAB3DO95716 219 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 KRASP01116 189 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 IL6RP08887 468 aaPredicted RBP5.39□□□□□ -1.55
TOP3A-207ENST00000493648 FGF2P09038 288 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF735P0CB33 412 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 DEFA4P12838 97 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 PGAM2P15259 253 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 HLA-GP17693 338 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZP3P21754 424 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 TNFSF8P32971 234 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 KRTAP10-11P60412 298 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 MEF2DQ14814 521 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 TATDN3Q17R31 274 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 DEFB121Q5J5C9 76 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 C10orf55Q5SWW7 151 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 STEAP1BQ6NZ63 245 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF343Q6P1L6 599 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 TBC1D26Q86UD7 250 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF429Q86V71 674 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 FAM223AQ8IWN6 122 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 CADM3Q8N126 398 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 TERB2Q8NHR7 220 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZFAND1Q8TCF1 268 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 DLX4Q92988 240 aaPredicted RBP5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF486Q96H40 463 aaPredicted RBP5.39□□□□□ -1.55
TOP3A-207ENST00000493648 SLIRPQ9GZT3 109 aaKnown RBP5.39□□□□□ -1.55
TOP3A-207ENST00000493648 FAM212BQ9NTI7 297 aaPredicted RBP5.39□□□□□ -1.55
TOP3A-207ENST00000493648 TMEM140Q9NV12 185 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 FKBP11Q9NYL4 201 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 PEF1Q9UBV8 284 aaKnown RBP5.39□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF257Q9Y2Q1 563 aa5.39□□□□□ -1.55
TOP3A-207ENST00000493648 NOTCH1P46531 2555 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TRBV9A0A0B4J1U6 114 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TRAV3A0A0B4J244 114 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TEX50A0A1B0GTY4 177 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 MARCH11A6NNE9 402 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 NPIPB5A8MRT5 1133 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 DISC1C4P0D8 188 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TEX22C9J3V5 150 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 CYB5BO43169 146 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 OR2J3O76001 311 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 ATG12O94817 140 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 PRH1P02810 166 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 CD74P04233 296 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 SERPINE2P07093 398 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 CRYGCP07315 174 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 AKAIN1P0CW23 69 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TRAPPC2P0DI81 140 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TRAPPC2BP0DI82 140 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 RPA2P15927 270 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 HIST1H1BP16401 226 aaKnown RBP5.38□□□□□ -1.55
TOP3A-207ENST00000493648 PSMB6P28072 239 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 S100A5P33763 92 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 G6PCP35575 357 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 ECI1P42126 302 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 SLURP1P55000 103 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 OR2B8PP59922 312 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 RHOGP84095 191 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 SCGB2B2Q4G0G5 96 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF585BQ52M93 769 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 FAM209BQ5JX69 171 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
TOP3A-207ENST00000493648 LHFPL1Q86WI0 220 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 CCDC71LQ8N9Z2 235 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 NECAP1Q8NC96 275 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 SMIM4Q8WVI0 70 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 OR4C12Q96R67 309 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 TSC22D3Q99576 134 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 SRSF8Q9BRL6 282 aaKnown RBP5.38□□□□□ -1.55
TOP3A-207ENST00000493648 ELOVL1Q9BW60 279 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 NXF2Q9GZY0 626 aaKnown RBP5.38□□□□□ -1.55
TOP3A-207ENST00000493648 AKIP1Q9NQ31 210 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
TOP3A-207ENST00000493648 E7EUB6 86 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 K7EIL1 84 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF701M0R085 212 aaPredicted RBP5.37□□□□□ -1.55
TOP3A-207ENST00000493648 GSTZ1O43708 216 aaPredicted RBP5.37□□□□□ -1.55
TOP3A-207ENST00000493648 SAP30O75446 220 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 MYOD1P15172 320 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 AREGP15514 252 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 CTRB1P17538 263 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 PTBP1P26599 531 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOP3A-207ENST00000493648 PIGPP57054 158 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 RND3P61587 244 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 DEFA5Q01523 94 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 ZNF45Q02386 682 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 DCTN2Q13561 401 aaKnown RBP5.37□□□□□ -1.55
TOP3A-207ENST00000493648 C15orf32Q32M92 178 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 CTRB2Q6GPI1 263 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 ACSM6Q6P461 480 aa5.37□□□□□ -1.55
TOP3A-207ENST00000493648 H2BFWTQ7Z2G1 175 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms