RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SGPP2Q8IWX5 399 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 SLC38A6Q8IZM9 456 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 PUSL1Q8N0Z8 303 aaKnown RBP7.02□□□□□ -1.29
HDAC6-232ENST00000489053 GPX8Q8TED1 209 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 FCAMRQ8WWV6 532 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 EEF1AKMT3Q96AZ1 226 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 TSC22D3Q99576 134 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 QTRT1Q9BXR0 403 aaKnown RBP7.02□□□□□ -1.29
HDAC6-232ENST00000489053 SLC2A9Q9NRM0 540 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 UPK2O00526 184 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-232ENST00000489053 ATG12O94817 140 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 KRASP01116 189 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 REG1AP05451 166 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 TRAPPC2P0DI81 140 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 TRAPPC2BP0DI82 140 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 SMIM18P0DKX4 95 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 NAT1P18440 290 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 TBPP20226 339 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 PSMB6P28072 239 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 GNRHRP30968 328 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 ARL3P36405 182 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 EIF4EBP1Q13541 118 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-232ENST00000489053 FAM106AQ4KMX7 169 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 THOC7Q6I9Y2 204 aaKnown RBP7.01□□□□□ -1.29
HDAC6-232ENST00000489053 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 RNASE11Q8TAA1 199 aaKnown RBP7.01□□□□□ -1.29
HDAC6-232ENST00000489053 RAB2BQ8WUD1 216 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 DGCR14Q96DF8 476 aaKnown RBP7.01□□□□□ -1.29
HDAC6-232ENST00000489053 CXorf58Q96LI9 332 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 FXYD6Q9H0Q3 95 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 FKBP11Q9NYL4 201 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 PRNDQ9UKY0 176 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
HDAC6-232ENST00000489053 ZNF320A2RRD8 509 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 CCDC160A6NGH7 325 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 TEX22C9J3V5 150 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 M0QYG6 137 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 GGCTO75223 188 aaKnown RBP7□□□□□ -1.29
HDAC6-232ENST00000489053 IL6RP08887 468 aaPredicted RBP7□□□□□ -1.29
HDAC6-232ENST00000489053 ZNF735P0CB33 412 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 AREGP15514 252 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 KLF5Q13887 457 aaPredicted RBP7□□□□□ -1.29
HDAC6-232ENST00000489053 CTF1Q16619 201 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 SCGB2B2Q4G0G5 96 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 H2BFWTQ7Z2G1 175 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 HAPLN4Q86UW8 402 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 Q8N402 240 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 CCDC71LQ8N9Z2 235 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 OR4A16Q8NH70 328 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 TMEM56Q96MV1 263 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 ASCL2Q99929 193 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
HDAC6-232ENST00000489053 C6orf62Q9GZU0 229 aaPredicted RBP7□□□□□ -1.29
HDAC6-232ENST00000489053 NAA50Q9GZZ1 169 aaKnown RBP7□□□□□ -1.29
HDAC6-232ENST00000489053 TUBA4BQ9H853 241 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 ZMAT4Q9H898 229 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 ANAPC10Q9UM13 185 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 OR51B2Q9Y5P1 312 aa7□□□□□ -1.29
HDAC6-232ENST00000489053 STAB2Q8WWQ8 2551 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TRBV7-1A0A0A6YYK4 115 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TRBV9A0A0B4J1U6 114 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 PPP5D1E7EU14 171 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TPPPO94811 219 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TRBV12-3P01733 135 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 IGHV3-23P01764 117 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 OR13C7P0DN81 318 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 G6PCP35575 357 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TAS2R19P59542 299 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 OR2B8PP59922 312 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 MRPS10P82664 201 aaKnown RBP6.99□□□□□ -1.29
HDAC6-232ENST00000489053 ZNF45Q02386 682 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 IL18Q14116 193 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 POU2AF1Q16633 256 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 MRGPRG-AS1Q2M3A8 158 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TRIM16LQ309B1 348 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 C11orf87Q6NUJ2 197 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 SLC25A24Q6NUK1 477 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 CLEC19AQ6UXS0 136 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TBC1D26Q86UD7 250 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 LYSMD2Q8IV50 215 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 ARRDC1Q8N5I2 433 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 OR52I2Q8NH67 350 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 ZFAND1Q8TCF1 268 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 LSM10Q969L4 123 aaKnown RBP6.99□□□□□ -1.29
HDAC6-232ENST00000489053 PDCD10Q9BUL8 212 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 COPZ2Q9P299 210 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 RABL2AQ9UBK7 228 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-232ENST00000489053 RABL2BQ9UNT1 228 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 LSM4Q9Y4Z0 139 aaKnown RBP6.99□□□□□ -1.29
HDAC6-232ENST00000489053 U3KQK5 164 aa6.99□□□□□ -1.29
HDAC6-232ENST00000489053 TRAV3A0A0B4J244 114 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 DISC1C4P0D8 188 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 BMPR1BO00238 502 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 NDUFB8O95169 186 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 OR2C1O95371 312 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 RAB3DO95716 219 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms