RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 AREGP15514 252 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 OR10W1Q8NGF6 305 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 VSTM2AQ8TAG5 236 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 HINT2Q9BX68 163 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 ZNF355PQ9NSJ1 428 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 NUBP2Q9Y5Y2 271 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 CENPXA8MT69 81 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 UPK2O00526 184 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 RBMXL2O75526 392 aaKnown RBP9.28□□□□□ -0.92
APTX-227ENST00000485479 HLA-GP17693 338 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 UCP1P25874 307 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 SLC35B1P78383 322 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 CD83Q01151 205 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 CENPSQ8N2Z9 138 aa9.28□□□□□ -0.92
APTX-227ENST00000485479 TEX22C9J3V5 150 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.93
APTX-227ENST00000485479 TMEM187Q14656 261 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 TEX38Q6PEX7 206 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 OR52B4Q8NGK2 314 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 RNASE11Q8TAA1 199 aaKnown RBP9.27□□□□□ -0.93
APTX-227ENST00000485479 SLC25A21Q9BQT8 299 aaPredicted RBP9.27□□□□□ -0.93
APTX-227ENST00000485479 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.93
APTX-227ENST00000485479 C20orf85Q9H1P6 137 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 NUDT15Q9NV35 164 aa9.27□□□□□ -0.93
APTX-227ENST00000485479 NAP1L6A6NFF2 107 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 IGHG4P01861 327 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 PSMB8P28062 276 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 RPL27AP46776 148 aaKnown RBP9.26□□□□□ -0.93
APTX-227ENST00000485479 ANKRD55Q3KP44 614 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 Q6ZRM9 215 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 FAM219AQ8IW50 185 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 FAM110DQ8TAY7 271 aaPredicted RBP9.26□□□□□ -0.93
APTX-227ENST00000485479 QTRT1Q9BXR0 403 aaKnown RBP9.26□□□□□ -0.93
APTX-227ENST00000485479 COA4Q9NYJ1 87 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 FOXA2Q9Y261 457 aaPredicted RBP9.26□□□□□ -0.93
APTX-227ENST00000485479 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 CDS2O95674 445 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 IGLV1-40P01703 118 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 C11orf87Q6NUJ2 197 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 LYZL2Q7Z4W2 148 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 ZNF695Q8IW36 515 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
APTX-227ENST00000485479 TCTEX1D1Q8N7M0 179 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 DEDD2Q8WXF8 326 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 COMMD5Q9GZQ3 224 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 OR51B2Q9Y5P1 312 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 S4R3C0 116 aa9.26□□□□□ -0.93
APTX-227ENST00000485479 A0A0B4J293 547 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 TEX50A0A1B0GTY4 177 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 NUDT19A8MXV4 375 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 HLA-AP01891 365 aaKnown RBP9.25□□□□□ -0.93
APTX-227ENST00000485479 TCRBP04435 133 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 SLC6A1P30531 599 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 CRIP2P52943 208 aaPredicted RBP9.25□□□□□ -0.93
APTX-227ENST00000485479 TPPP2P59282 170 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
APTX-227ENST00000485479 AKIRIN2Q53H80 203 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 CXorf66Q5JRM2 361 aaPredicted RBP9.25□□□□□ -0.93
APTX-227ENST00000485479 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 RBPMSQ93062 196 aaKnown RBP9.25□□□□□ -0.93
APTX-227ENST00000485479 C7orf50Q9BRJ6 194 aaKnown RBP9.25□□□□□ -0.93
APTX-227ENST00000485479 GON7Q9BXV9 100 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
APTX-227ENST00000485479 FAM240BA0A1B0GVZ2 78 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 C15orf61A6NNL5 157 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 CREBL2O60519 120 aaPredicted RBP9.24□□□□□ -0.93
APTX-227ENST00000485479 SNAPC5O75971 98 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 RAB9AP51151 201 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 RPL23AP62750 156 aaKnown RBP9.24□□□□□ -0.93
APTX-227ENST00000485479 ASAH1Q13510 395 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 C4orf46Q504U0 113 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 SLC25A42Q86VD7 318 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 OR4A5Q8NH83 315 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 SPIN2AQ99865 258 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 SPIN2BQ9BPZ2 258 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
APTX-227ENST00000485479 TRGV3P03979 118 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 OR4E1P0C645 316 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 P0C879 139 aa9.24□□□□□ -0.93
APTX-227ENST00000485479 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms