RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HSPE1P61604 102 aaKnown RBP10.62□□□□□ -0.71
SEC13-216ENST00000479868 CDSNQ15517 529 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 LRRC10Q5BKY1 277 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 GCSAMLQ5JQS6 135 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 ZNF833PQ6ZTB9 187 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 VAX2Q9UIW0 290 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 IGHV1-69-2A0A0G2JMI3 117 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 ZNF727A8MUV8 499 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 IL6RP08887 468 aaPredicted RBP10.62□□□□□ -0.71
SEC13-216ENST00000479868 FOLR2P14207 255 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
SEC13-216ENST00000479868 TAGLN2P37802 199 aaKnown RBP10.62□□□□□ -0.71
SEC13-216ENST00000479868 KLRB1Q12918 225 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 EFNB3Q15768 340 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 RTL8BQ17RB0 113 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 RAB24Q969Q5 203 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 TVP23CQ96ET8 276 aa10.62□□□□□ -0.71
SEC13-216ENST00000479868 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
SEC13-216ENST00000479868 SAV1Q9H4B6 383 aaPredicted RBP10.62□□□□□ -0.71
SEC13-216ENST00000479868 hCG_1809904A0A1W2PP81 198 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 A0A1W2PR64 198 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 A0A1W2PRV1 198 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 B9A039 149 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 IFNA4P05014 189 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 GATAD1Q8WUU5 269 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 ACTR3CQ9C0K3 210 aaPredicted RBP10.61□□□□□ -0.71
SEC13-216ENST00000479868 OR51B2Q9Y5P1 312 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 NCOR2Q9Y618 2525 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 OR2C1O95371 312 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 IFNA1P01562 189 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 OPN1MWP04001 364 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 CHRNB4P30926 498 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 REG1BP48304 166 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 CD81P60033 236 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 DIAPH2-AS1Q14236 149 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 HABP2Q14520 560 aaPredicted RBP10.61□□□□□ -0.71
SEC13-216ENST00000479868 FBXL19-AS1Q494R0 122 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 SLC35E3Q7Z769 313 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 ST6GALNAC3Q8NDV1 305 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 P2RX4Q99571 388 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 GGACTQ9BVM4 153 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 HINT2Q9BX68 163 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 KAAG1Q9UBP8 84 aa10.61□□□□□ -0.71
SEC13-216ENST00000479868 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 UPK2O00526 184 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 SAA1P0DJI8 122 aaPredicted RBP10.6□□□□□ -0.71
SEC13-216ENST00000479868 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 NPY1RP25929 384 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 C1orf159Q96HA4 380 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 MGST2Q99735 147 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 COL6A6A6NMZ7 2263 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 H0YJW9 148 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 CA2P00918 260 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
SEC13-216ENST00000479868 DLX6P56179 175 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 ADORA2A-AS1P86434 159 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
SEC13-216ENST00000479868 ACOT6Q3I5F7 207 aaPredicted RBP10.6□□□□□ -0.71
SEC13-216ENST00000479868 RNF212Q495C1 297 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
SEC13-216ENST00000479868 RBMS3Q6XE24 437 aaKnown RBP10.6□□□□□ -0.71
SEC13-216ENST00000479868 ENY2Q9NPA8 101 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 PRNDQ9UKY0 176 aa10.6□□□□□ -0.71
SEC13-216ENST00000479868 J3QR06 171 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 CYB5BO43169 146 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 MPDU1O75352 247 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 YIF1AO95070 293 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 RAB5AP20339 215 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 MUC15Q8N387 334 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 A0A087WWC5 75 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 OPRK1P41145 380 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 PRCDQ00LT1 54 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 TMEM155Q4W5P6 130 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 OR5AN1Q8NGI8 311 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 OR10X1Q8NGY0 326 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 GGTLC1Q9BX51 225 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
SEC13-216ENST00000479868 ZNF257Q9Y2Q1 563 aa10.59□□□□□ -0.71
SEC13-216ENST00000479868 LSM4Q9Y4Z0 139 aaKnown RBP10.59□□□□□ -0.71
SEC13-216ENST00000479868 HRNRQ86YZ3 2850 aaPredicted RBP10.58□□□□□ -0.72
SEC13-216ENST00000479868 TACC2O95359 2948 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 TEX50A0A1B0GTY4 177 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 NDUFA2O43678 99 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 KBTBD11O94819 623 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 APOA2P02652 100 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 COL8A2P25067 703 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 PSMB3P49720 205 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 WDR25Q64LD2 544 aaPredicted RBP10.58□□□□□ -0.72
SEC13-216ENST00000479868 ZNF343Q6P1L6 599 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 C11orf42Q8N5U0 333 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 HARBI1Q96MB7 349 aa10.58□□□□□ -0.72
SEC13-216ENST00000479868 BET1LQ9NYM9 111 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms