RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 SMIM17P0DL12 118 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 SMIM10L2AP0DMW4 78 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 SMIM10L2BP0DMW5 78 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 G6PCP35575 357 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PPP1CCP36873 323 aaKnown RBP2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 GRK1Q15835 563 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 SLC25A34Q6PIV7 304 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 WDR59Q6PJI9 974 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 TCF24Q7RTU0 167 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PACRGLQ8N7B6 248 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 FER1L6-AS1Q8NA97 138 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 SLC25A40Q8TBP6 338 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 MRPL30Q8TCC3 161 aaKnown RBP2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF675Q8TD23 568 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PLEKHB2Q96CS7 222 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 RBMXL1Q96E39 390 aaKnown RBP2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 CCDC115Q96NT0 180 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PEBP4Q96S96 227 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PFDN5Q99471 154 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 SEC22CQ9BRL7 303 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 C20orf27Q9GZN8 174 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 WDR61Q9GZS3 305 aaKnown RBP2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 FAM60AQ9NP50 221 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 SPANXA1Q9NS26 97 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 AK3Q9UIJ7 227 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PLXNB3Q9ULL4 1909 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 PTPRJQ12913 1337 aa2.16□□□□□ -2.06
SMARCA1-204ENST00000478420 NEO1Q92859 1461 aa2.15□□□□□ -2.06
SMARCA1-204ENST00000478420 TRBV20OR9-2A0A075B6H5 130 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 TRBV19A0A075B6N1 114 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1D-17A0A075B6S4 117 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 IGHV1-3A0A0C4DH29 117 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 ARL5CA6NH57 179 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 LINC00587B1AMM8 73 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 PLA2G10O15496 165 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 PFDN1O60925 122 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 OR2J2O76002 312 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 IGLV3-19P01714 112 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 RBP1P09455 135 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 LINC00869P0C866 280 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 RPL7P18124 248 aaKnown RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 PPIBP23284 216 aaKnown RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 BLVRBP30043 206 aaPredicted RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 OPRK1P41145 380 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 EMP1P54849 157 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 CKS1BP61024 79 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 HOXC5Q00444 222 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 ENDOGQ14249 297 aaKnown RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 FAM104BQ5XKR9 115 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 ZFP1Q6P2D0 407 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 Q6Q795 121 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF101Q8IZC7 436 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 OR11G2Q8NGC1 345 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 OR9A2Q8NGT5 310 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 RNASE11Q8TAA1 199 aaKnown RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 LINC01560Q8TB33 94 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 THEM6Q8WUY1 208 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 SLC7A6Q92536 515 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 CAPZA3Q96KX2 299 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 TBL1YQ9BQ87 522 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 HSPB9Q9BQS6 159 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 PBOV1Q9GZY1 135 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 TP73-AS1Q9UF72 201 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 RPUSD1Q9UJJ7 312 aaKnown RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 AMMECR1Q9Y4X0 333 aaPredicted RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 PHLDA3Q9Y5J5 127 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 AHDC1Q5TGY3 1603 aaPredicted RBP2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 DOCK3Q8IZD9 2030 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 BICRAQ9NZM4 1560 aa2.15□□□□□ -2.07
SMARCA1-204ENST00000478420 COL1A2P08123 1366 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 TONSLQ96HA7 1378 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 IGHV3-21A0A0B4J1V1 117 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1D-43A0A0B4J1Z2 117 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 DPRXA6NFQ7 191 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 RIIAD1A6NNX1 92 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 DEGS1O15121 323 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 PDYNP01213 254 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1-17P01599 117 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 RPS4Y1P22090 263 aaKnown RBP2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 S100A1P23297 94 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 RPS3P23396 243 aaKnown RBP eCLIP2.14□□□□□ -2.078e-16■■□□□ 12.4
SMARCA1-204ENST00000478420 ZNF616Q08AN1 781 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 DHRS2Q13268 280 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 OR8B8Q15620 311 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 GLT8D1Q68CQ7 371 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 ZFAND6Q6FIF0 208 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 AMN1Q8IY45 258 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 ZFP62Q8NB50 900 aaPredicted RBP2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 OR4D11Q8NGI4 311 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 OR9Q1Q8NGQ5 310 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 OR4K13Q8NH42 304 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 OR5P3Q8WZ94 311 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 SLC25A46Q96AG3 418 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 MALSU1Q96EH3 234 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 IP6K3Q96PC2 410 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 TMEM70Q9BUB7 260 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 CCDC32Q9BV29 185 aa2.14□□□□□ -2.07
SMARCA1-204ENST00000478420 OR2D2Q9H210 308 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms