RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 OR4D5Q8NGN0 318 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 KCNS1Q96KK3 526 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 PARLQ9H300 379 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 CHD3Q12873 2000 aaKnown RBP9.89□□□□□ -0.83
U2AF1-209ENST00000475639 PSMB11A5LHX3 300 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 SLC17A3O00476 420 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 MMP16P51512 607 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 COA6Q5JTJ3 125 aaKnown RBP9.89□□□□□ -0.83
U2AF1-209ENST00000475639 RHBDD2Q6NTF9 364 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM252Q8N6L7 170 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 OR8G5Q8NG78 346 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 GPR82Q96P67 336 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 PCGF1Q9BSM1 259 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 POLR3KQ9Y2Y1 108 aaPredicted RBP9.89□□□□□ -0.83
U2AF1-209ENST00000475639 OR51B2Q9Y5P1 312 aa9.89□□□□□ -0.83
U2AF1-209ENST00000475639 TRAV8-6A0A0B4J262 113 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 C19orf67A6NJJ6 358 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 NDUFS8O00217 210 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 VSIG8P0DPA2 414 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 EPHA8P29322 1005 aaPredicted RBP9.88□□□□□ -0.83
U2AF1-209ENST00000475639 OTX1P32242 354 aaPredicted RBP9.88□□□□□ -0.83
U2AF1-209ENST00000475639 CX3CL1P78423 397 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 QRFPP83859 136 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 P2RY6Q15077 328 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 FAM106AQ4KMX7 169 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 LHFPL1Q86WI0 220 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 IGHV3-21A0A0B4J1V1 117 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 HSPB1P04792 205 aaKnown RBP9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM177Q53S58 311 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 MDP1Q86V88 176 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM74BQ9NUR3 256 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TRAV39A0A0B4J263 110 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TCF23Q7RTU1 214 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 SRSF12Q8WXF0 261 aaKnown RBP9.88□□□□□ -0.83
U2AF1-209ENST00000475639 SPINT1O43278 529 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 VCANP13611 3396 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM50BP56557 158 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 OR1K1Q8NGR3 316 aa9.88□□□□□ -0.83
U2AF1-209ENST00000475639 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
U2AF1-209ENST00000475639 PPIAL4EA0A075B759 164 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 PPIAL4DF5H284 164 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 PPIAL4FP0DN26 164 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 SRIP30626 198 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 PRSS12P56730 875 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 MGAT2Q10469 447 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 NIT1Q86X76 327 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 FAM216AQ8WUB2 273 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 PPIAL4AQ9Y536 164 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 IGKV1D-42A0A075B6H8 117 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 CXorf51AA0A1B0GTR3 108 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 H7C1H1 209 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 SLC25A17O43808 307 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF205O95201 554 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 BHLHA15Q7RTS1 189 aaPredicted RBP9.87□□□□□ -0.83
U2AF1-209ENST00000475639 DOPEY1Q5JWR5 2465 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 MGST3O14880 152 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 PITX3O75364 302 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 TM4SF4P48230 202 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
U2AF1-209ENST00000475639 CBLN3Q6UW01 205 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 ABHD14BQ96IU4 210 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
U2AF1-209ENST00000475639 MPZL1O95297 269 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 CLDN14O95500 239 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 PSG2P11465 335 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF56Q15929 161 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF418Q8TF45 676 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 OBSL1O75147 1896 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 A0A0A6YYD4 124 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM262E9PQX1 116 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ETV2O00321 342 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 SLC25A20O43772 301 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 IL6RP08887 468 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 SOX8P57073 446 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 RUNX1Q01196 453 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ANKRD37Q7Z713 158 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF414Q96IQ9 312 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 LRRC61Q9BV99 259 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 GPX1P07203 203 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 FAM74A4Q5TZK3 123 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 SP5Q6BEB4 398 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 INO80CQ6PI98 192 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 C9orf40Q8IXQ3 194 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ALKBH7Q9BT30 221 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF430Q9H8G1 570 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF71Q9NQZ8 489 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 MPLP40238 635 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 PDLIM4P50479 330 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 KRTCAP3Q53RY4 240 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 LINC00596Q86U02 117 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 SCARF2Q96GP6 870 aaPredicted RBP9.86□□□□□ -0.83
U2AF1-209ENST00000475639 PGLYRP4Q96LB8 373 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ZNF714Q96N38 554 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 RBKSQ9H477 322 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 DNAJC4Q9NNZ3 241 aa9.86□□□□□ -0.83
U2AF1-209ENST00000475639 ARFGEF3Q5TH69 2177 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms