RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RPL8P62917 257 aaKnown RBP13.6□□□□□ -0.23
GTF3A-204ENST00000438571 KLK9Q2XQG4 91 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 FAM209BQ5JX69 171 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 BTNL8Q6UX41 500 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 SPAG16Q8N0X2 631 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 UXS1Q8NBZ7 420 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 BEST4Q8NFU0 473 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 TECRQ9NZ01 308 aaKnown RBP13.6□□□□□ -0.23
GTF3A-204ENST00000438571 KLK9Q9UKQ9 250 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 RAB26Q9ULW5 256 aa13.6□□□□□ -0.23
GTF3A-204ENST00000438571 IGHV3-35A0A0C4DH35 117 aa13.59□□□□□ -0.23
GTF3A-204ENST00000438571 ZNF320A2RRD8 509 aa13.59□□□□□ -0.23
GTF3A-204ENST00000438571 HLA-GP17693 338 aa13.59□□□□□ -0.23
GTF3A-204ENST00000438571 ARPC4P59998 168 aa13.59□□□□□ -0.23
GTF3A-204ENST00000438571 TM4SF20Q53R12 229 aa13.59□□□□□ -0.23
GTF3A-204ENST00000438571 ZNF57Q68EA5 555 aaPredicted RBP13.59□□□□□ -0.23
GTF3A-204ENST00000438571 BET1LQ9NYM9 111 aa13.59□□□□□ -0.23
GTF3A-204ENST00000438571 TRAV18A0A075B6X5 111 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 IGLC7A0M8Q6 106 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 SULT1C2O00338 296 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 HRASP01112 189 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 PPYP01298 95 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 GPR183P32249 361 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 FXYD4P59646 89 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 OR2B8PP59922 312 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 TPRA1Q86W33 373 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 HRASLSQ9HDD0 168 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 SSR3Q9UNL2 185 aa13.58□□□□□ -0.24
GTF3A-204ENST00000438571 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 SCGNO76038 276 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 JTBO76095 146 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 RPA2P15927 270 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 HOGA1Q86XE5 327 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 OR52B4Q8NGK2 314 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 SLC5A7Q9GZV3 580 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
GTF3A-204ENST00000438571 FRAS1Q86XX4 4008 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
GTF3A-204ENST00000438571 S1PR2O95136 353 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 CLEC3BP05452 202 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 DEFA4P12838 97 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 IDNKQ5T6J7 187 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 ZNF818PQ6ZRF7 136 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 SLC16A13Q7RTY0 426 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 OR10W1Q8NGF6 305 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 OR51H1Q8NH63 302 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 ZNF502Q8TBZ5 544 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 OVOL2Q9BRP0 275 aa13.56□□□□□ -0.24
GTF3A-204ENST00000438571 UPK2O00526 184 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 ATP6V1G2O95670 118 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 DHFRP00374 187 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
GTF3A-204ENST00000438571 EWSR1Q01844 656 aaKnown RBP eCLIP13.55□□□□□ -0.24
GTF3A-204ENST00000438571 MSMO1Q15800 293 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 TMEM17Q86X19 198 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 OR4A5Q8NH83 315 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 FCGR1BQ92637 280 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 GGTLC1Q9BX51 225 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 TMEM140Q9NV12 185 aa13.55□□□□□ -0.24
GTF3A-204ENST00000438571 TRBV7-1A0A0A6YYK4 115 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 LOC100506127A0A0U1RQW1 187 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 TGFBR1P36897 503 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 TAS2R31P59538 309 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 POU2AF1Q16633 256 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 ZNF585BQ52M93 769 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 CXorf58Q96LI9 332 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 UBQLN2Q9UHD9 624 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 ETV7Q9Y603 341 aa13.54□□□□□ -0.24
GTF3A-204ENST00000438571 LOC102724200A0A096LPH7 203 aaPredicted RBP13.53□□□□□ -0.24
GTF3A-204ENST00000438571 IGHV3-21A0A0B4J1V1 117 aa13.53□□□□□ -0.24
GTF3A-204ENST00000438571 RBFOX2O43251 390 aaKnown RBP eCLIP13.53□□□□□ -0.247e-8■■■□□ 15.2
GTF3A-204ENST00000438571 HPRT1P00492 218 aa13.53□□□□□ -0.24
GTF3A-204ENST00000438571 NQO2P16083 231 aa13.53□□□□□ -0.24
GTF3A-204ENST00000438571 MFAP2P55001 183 aa13.53□□□□□ -0.24
GTF3A-204ENST00000438571 CATR1Q13166 79 aa13.53□□□□□ -0.24
GTF3A-204ENST00000438571 WT1-ASQ06250 92 aa13.52□□□□□ -0.25
GTF3A-204ENST00000438571 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
GTF3A-204ENST00000438571 ZBTB34Q8NCN2 500 aa13.52□□□□□ -0.25
GTF3A-204ENST00000438571 ZNF436Q9C0F3 470 aaPredicted RBP13.52□□□□□ -0.25
GTF3A-204ENST00000438571 IGHV3OR16-8A0A075B7F1 116 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 TGOLN2O43493 480 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 GNRHRP30968 328 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 SCAND1P57086 179 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 PMS2P11Q13670 270 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 DMBX1Q8NFW5 382 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 OR5AP2Q8NGF4 316 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 OR1L6Q8NGR2 347 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 TMEM190Q8WZ59 177 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 ZNF414Q96IQ9 312 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 QTRT1Q9BXR0 403 aaKnown RBP13.51□□□□□ -0.25
GTF3A-204ENST00000438571 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 NSG2Q9Y328 171 aa13.51□□□□□ -0.25
GTF3A-204ENST00000438571 OR2T8A6NH00 312 aa13.5□□□□□ -0.25
GTF3A-204ENST00000438571 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms