RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PUSL1Q8N0Z8 303 aaKnown RBP11.58□□□□□ -0.55
CALD1-207ENST00000430085 OR4P4Q8NGL7 312 aa11.58□□□□□ -0.55
CALD1-207ENST00000430085 BPESC1Q9GZL8 116 aa11.58□□□□□ -0.55
CALD1-207ENST00000430085 UQCC1Q9NVA1 299 aa11.58□□□□□ -0.55
CALD1-207ENST00000430085 TSPAN15O95858 294 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 FHITP49789 147 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 BTNL8Q6UX41 500 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 MOB3BQ86TA1 216 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 OR4A5Q8NH83 315 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 WDR61Q9GZS3 305 aaKnown RBP11.58□□□□□ -0.56
CALD1-207ENST00000430085 PLEKHA3Q9HB20 300 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 FBXO7Q9Y3I1 522 aa11.58□□□□□ -0.56
CALD1-207ENST00000430085 IGHV3-72A0A0B4J1Y9 119 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 IGHV1-3A0A0C4DH29 117 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
CALD1-207ENST00000430085 PRTN3P24158 256 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 RAB11AP62491 216 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 VMA21Q3ZAQ7 101 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 KIR3DL3Q8N743 410 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 OR5B3Q8NH48 314 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 IGFBPL1Q8WX77 278 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 TAF15Q92804 592 aaKnown RBP eCLIP11.57□□□□□ -0.56
CALD1-207ENST00000430085 NARS2Q96I59 477 aaKnown RBP11.57□□□□□ -0.56
CALD1-207ENST00000430085 LINC00052Q96N35 136 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 PSMG3Q9BT73 122 aaPredicted RBP11.57□□□□□ -0.56
CALD1-207ENST00000430085 RSG1Q9BU20 258 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 COMMD5Q9GZQ3 224 aa11.57□□□□□ -0.56
CALD1-207ENST00000430085 OPN1MWP04001 364 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 OPN1MW2P0DN77 364 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 OPN1MW3P0DN78 364 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 MYOD1P15172 320 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 ZFP36P26651 326 aaKnown RBP11.56□□□□□ -0.56
CALD1-207ENST00000430085 HTR1DP28221 377 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 LGALS7P47929 136 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 RPL8P62917 257 aaKnown RBP11.56□□□□□ -0.56
CALD1-207ENST00000430085 LCN2P80188 198 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 PRCDQ00LT1 54 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 C1orf122Q6ZSJ8 110 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 SLC24A4Q8NFF2 622 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 OR11H6Q8NGC7 330 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 RRHO14718 337 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 AGPAT2O15120 278 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 IFNA4P05014 189 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 CEACAM3P40198 252 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 ETV3LQ6ZN32 361 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 BPIFCQ8NFQ6 507 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
CALD1-207ENST00000430085 TACC2O95359 2948 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 TET2Q6N021 2002 aaPredicted RBP11.55□□□□□ -0.56
CALD1-207ENST00000430085 FBN2P35556 2912 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 IGLV2-23P01705 113 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 FGF7P21781 194 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 NPY1RP25929 384 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 VWC2Q2TAL6 325 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 CCDC28AQ8IWP9 274 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 KPTNQ9Y664 436 aa11.55□□□□□ -0.56
CALD1-207ENST00000430085 LY6LH3BQJ8 138 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 SLC25A17O43808 307 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 SERF2P84101 59 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 AKR1C1Q04828 323 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 KLRD1Q13241 179 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 TPTE2P1Q5T6R2 138 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 VMO1Q7Z5L0 202 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 COMMD1Q8N668 190 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 OR1L8Q8NGR8 309 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 PIMREGQ9BSJ6 248 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 DPM3Q9P2X0 92 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 CD1BP29016 333 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 LMO4P61968 165 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 FAM168AQ92567 244 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 GGACTQ9BVM4 153 aa11.54□□□□□ -0.56
CALD1-207ENST00000430085 ASH1LQ9NR48 2969 aaKnown RBP11.53□□□□□ -0.56
CALD1-207ENST00000430085 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 SMCO3A2RU48 225 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 CA2P00918 260 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 H2AFB1P0C5Y9 115 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 ATP5J2P56134 94 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 LFNGQ8NES3 379 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 RITA1Q96K30 269 aa11.53□□□□□ -0.56
CALD1-207ENST00000430085 A0A1B0GV50 99 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 A0A1W2PPI3 338 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 ODF3BA8MYP8 253 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 FOXH1O75593 365 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 SNCAP37840 140 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 RAB2AP61019 212 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.56
CALD1-207ENST00000430085 HNF4GQ14541 408 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 HCP5Q6MZN7 132 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 CLEC2AQ6UVW9 174 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 TEX45Q8NA69 505 aa11.52□□□□□ -0.56
CALD1-207ENST00000430085 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms