RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 LGALS9O00182 355 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 AIREO43918 545 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 RPA2P15927 270 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 GNRHRP30968 328 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 RFX2P48378 723 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 CD81P60033 236 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 MSMO1Q15800 293 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 GTSCR1Q86UQ5 136 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 OR5AP2Q8NGF4 316 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 OR10W1Q8NGF6 305 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 OR2K2Q8NGT1 345 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 VSTM2AQ8TAG5 236 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 GIMAP1Q8WWP7 306 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 FAM110AQ9BQ89 295 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 HIPK2Q9H2X6 1198 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 TUBA4BQ9H853 241 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 MLXQ9UH92 298 aa12.85□□□□□ -0.35
CPSF4-203ENST00000430038 A0A0A6YYH2 397 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 A6NJ64 397 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 UPK2O00526 184 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 S1PR2O95136 353 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 HRASP01112 189 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 CBLN1P23435 193 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 ARL3P36405 182 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 POU2AF1Q16633 256 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
CPSF4-203ENST00000430038 LCE6AA0A183 80 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 DPPA5A6NC42 116 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPSF4-203ENST00000430038 XRCC3O43542 346 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 CLEC3BP05452 202 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 LSM3P62310 102 aaKnown RBP12.83□□□□□ -0.36
CPSF4-203ENST00000430038 KCTD21Q4G0X4 260 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 DHRS11Q6UWP2 260 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 TMEM17Q86X19 198 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 ZBTB34Q8NCN2 500 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 DIABLOQ9NR28 239 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 CEPT1Q9Y6K0 416 aa12.83□□□□□ -0.36
CPSF4-203ENST00000430038 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 HPRT1P00492 218 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 MFAP2P55001 183 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 TAS2R31P59538 309 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 TM4SF20Q53R12 229 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 LYSMD2Q8IV50 215 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 TMEM61Q8N0U2 210 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 ISOC1Q96CN7 298 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 TMEM140Q9NV12 185 aa12.82□□□□□ -0.36
CPSF4-203ENST00000430038 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 PMP2P02689 132 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 NQO2P16083 231 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 WT1-ASQ06250 92 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 GUCA2BQ16661 112 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 ZNF585BQ52M93 769 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 ZNF502Q8TBZ5 544 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 DYNLRB2Q8TF09 96 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 EEF1AKMT3Q96AZ1 226 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 ZNF414Q96IQ9 312 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
CPSF4-203ENST00000430038 ZNF320A2RRD8 509 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 A8MWP6 167 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 PGLYRP1O75594 196 aaPredicted RBP12.8□□□□□ -0.36
CPSF4-203ENST00000430038 NAT1P18440 290 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 TAS2R20P59543 309 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 FAM209BQ5JX69 171 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 LAX1Q8IWV1 398 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 ZNF2Q9BSG1 426 aaPredicted RBP12.8□□□□□ -0.36
CPSF4-203ENST00000430038 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 TECRQ9NZ01 308 aaKnown RBP12.8□□□□□ -0.36
CPSF4-203ENST00000430038 EHFQ9NZC4 300 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
CPSF4-203ENST00000430038 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 TPPPO94811 219 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 RLN1P04808 185 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 EIF4EP06730 217 aaKnown RBP12.79□□□□□ -0.36
CPSF4-203ENST00000430038 DEFA4P12838 97 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 GPR183P32249 361 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 CBX5P45973 191 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 UBE2NLQ5JXB2 153 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 SAMD12Q8N8I0 201 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 FCAMRQ8WWV6 532 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 MOB3AQ96BX8 217 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
CPSF4-203ENST00000430038 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 SLC2A8Q9NY64 477 aa12.79□□□□□ -0.36
CPSF4-203ENST00000430038 TRBV7-1A0A0A6YYK4 115 aa12.78□□□□□ -0.36
CPSF4-203ENST00000430038 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
CPSF4-203ENST00000430038 F8W735 103 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-203ENST00000430038 SCAF4O95104 1147 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms