RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 CFHR3Q02985 330 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 SRSF4Q08170 494 aaKnown RBP10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 OR1L8Q8NGR8 309 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 GALNT14Q96FL9 552 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 GPHA2Q96T91 129 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 GPR61Q9BZJ8 451 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
GTF3C2-204ENST00000423998 C13orf42A0A1B0GVH6 325 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 CRYM-AS1A6NIL9 109 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 G3V318 75 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 DUS4LO95620 317 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 CDS2O95674 445 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 OR9G9P0C7N8 305 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 DEFA4P12838 97 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 IL7P13232 177 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 PI3P19957 117 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 UCP1P25874 307 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 MYCNOSP40205 109 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 PJVKQ0ZLH3 352 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 ZNF585BQ52M93 769 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 FAAP20Q6NZ36 180 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 MZT2BQ6NZ67 158 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 FAM110DQ8TAY7 271 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 RTBDNQ9BSG5 229 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 TMEM222Q9H0R3 208 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 C5orf66Q9H5L9 145 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 COA4Q9NYJ1 87 aa10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 ZMAT5Q9UDW3 170 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-204ENST00000423998 TET2Q6N021 2002 aaPredicted RBP10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 TRGV3P03979 118 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 IL6RP08887 468 aaPredicted RBP10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 AKR1C4P17516 323 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 G6PCP35575 357 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 BAK1Q16611 211 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 LGI3Q8N145 548 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 CENPSQ8N2Z9 138 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 KLHL30-AS1Q8NEE0 82 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 DPF1Q92782 380 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 FYTTD1Q96QD9 318 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 FAM103A1Q9BTL3 118 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 MCRIP2Q9BUT9 160 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
GTF3C2-204ENST00000423998 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 FAM223BA6NKX1 122 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 EGR2P11161 476 aaPredicted RBP10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 TPPP2P59282 170 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 ERHP84090 104 aaKnown RBP10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 NDPQ00604 133 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 RUNX1Q01196 453 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 C19orf54Q5BKX5 351 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 TCTEX1D4Q5JR98 221 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 ZNF429Q86V71 674 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 FAM223AQ8IWN6 122 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 OR5T1Q8NG75 326 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 LSM10Q969L4 123 aaKnown RBP10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 SEC22AQ96IW7 307 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 AKIP1Q9NQ31 210 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 OR51B2Q9Y5P1 312 aa10.79□□□□□ -0.68
GTF3C2-204ENST00000423998 OR5AC1P0C628 307 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 OR8U8P0C7N1 319 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 CD33P20138 364 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 SUB1P53999 127 aaKnown RBP eCLIP10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 DEFA1P59665 94 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 DEFA3P59666 94 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 HSPE1P61604 102 aaKnown RBP10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 TATDN3Q17R31 274 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 TMED4Q7Z7H5 227 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 GLYATL2Q8WU03 294 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 MRGPRFQ96AM1 343 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 TP53RKQ96S44 253 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 RANGRFQ9HD47 186 aaPredicted RBP10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 ENY2Q9NPA8 101 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 TMEM56-RWDD3S4R434 201 aa10.78□□□□□ -0.68
GTF3C2-204ENST00000423998 C15orf61A6NNL5 157 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 CCL24O00175 119 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 LYRM1O43325 122 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 NDUFB6O95139 128 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 CRYGCP07315 174 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 PSMB6P28072 239 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 MECP2P51608 486 aaKnown RBP10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 OR2B8PP59922 312 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 ATP5G2Q06055 141 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 SP6Q3SY56 376 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 MYOZ3Q8TDC0 251 aa10.77□□□□□ -0.69
GTF3C2-204ENST00000423998 CXorf58Q96LI9 332 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms