RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 FAUP35544 74 aaKnown RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 TGFBR1P36897 503 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 BRWD1-AS2P59051 145 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 FXYD4P59646 89 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 AP3S2P59780 193 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 GNB1P62873 340 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 SSBP2P81877 361 aaPredicted RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 NDPQ00604 133 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 PJVKQ0ZLH3 352 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 KLF5Q13887 457 aaPredicted RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 MRGPRG-AS1Q2M3A8 158 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 CTRB2Q6GPI1 263 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 LHFPL1Q86WI0 220 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 GPHB5Q86YW7 130 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 FAM219AQ8IW50 185 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 MRAPQ8TCY5 172 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 VN1R17PQ8TDU5 208 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 DCUN1D4Q92564 292 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 C5orf30Q96GV9 206 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 DIRAS2Q96HU8 199 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 ABHD1Q96SE0 405 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 PRRT1Q99946 306 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 FAM103A1Q9BTL3 118 aaKnown RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 NXF2Q9GZY0 626 aaKnown RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 GNB4Q9HAV0 340 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 HRASLSQ9HDD0 168 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 AURKAIP1Q9NWT8 199 aaPredicted RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 COA4Q9NYJ1 87 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 SCP2D1Q9UJQ7 156 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 KCNIP3Q9Y2W7 256 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 FABP12A6NFH5 140 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 A8MZ25 164 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 INS-IGF2F8WCM5 200 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 CTDSP2O14595 271 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 GGCTO75223 188 aaKnown RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 RAB3DO95716 219 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 AKAIN1P0CW23 69 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 DEFA4P12838 97 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 LPAR6P43657 344 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 ELLP55199 621 aaPredicted RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 ATP5IP56385 69 aaPredicted RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 RAB25P57735 213 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 OR2B8PP59922 312 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 ERHP84090 104 aaKnown RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 DHODHQ02127 395 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 CNPY1Q3B7I2 92 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 FAM106AQ4KMX7 169 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 ASPHD1Q5U4P2 390 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 STEAP1BQ6NZ63 245 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 SPSB3Q6PJ21 355 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 LINC00299Q6ZSB3 139 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 H2BFWTQ7Z2G1 175 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 SNX29P2Q8IUI4 249 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 LAX1Q8IWV1 398 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 OR51H1Q8NH63 302 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 SMIM4Q8WVI0 70 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 DLX4Q92988 240 aaPredicted RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 EEF1AKMT3Q96AZ1 226 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 MS4A10Q96PG2 267 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 TXN2Q99757 166 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 SOSTQ9BQB4 213 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 PALMDQ9NP74 551 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 SLC2A8Q9NY64 477 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 TECRQ9NZ01 308 aaKnown RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 KLK11Q9UBX7 282 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 ZNF256Q9Y2P7 627 aaPredicted RBP4.93□□□□□ -1.62
USP54-202ENST00000413442 TNCP24821 2201 aa4.93□□□□□ -1.62
USP54-202ENST00000413442 TEX50A0A1B0GTY4 177 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 MEIS3P1A6NDR6 274 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 TEX22C9J3V5 150 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 CORTO00230 105 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 KRASP01116 189 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 IGLV1-51P01701 117 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 CD3DP04234 171 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 CD5P06127 495 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 CTSDP07339 412 aaPredicted RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 PTHLHP12272 177 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 HOXD3P31249 432 aaPredicted RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 TNFSF8P32971 234 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 SUB1P53999 127 aaKnown RBP eCLIP4.92□□□□□ -1.62
USP54-202ENST00000413442 HSPE1P61604 102 aaKnown RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 RHOGP84095 191 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 IL18Q14116 193 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 SPCS2Q15005 226 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 RPEL1Q2QD12 228 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 ZNF585BQ52M93 769 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 DEFB121Q5J5C9 76 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 C18orf65Q6ZTR6 163 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 TBC1D26Q86UD7 250 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 NOXA1Q86UR1 476 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 GDPD1Q8N9F7 314 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 OR52I2Q8NH67 350 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 OR4A16Q8NH70 328 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 MCFD2Q8NI22 146 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 IL22RA2Q969J5 263 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 LSM10Q969L4 123 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms