RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 RPL27AP46776 148 aaKnown RBP16.27■□□□□ 0.2
C4orf48-202ENST00000409860 LYZL2Q7Z4W2 148 aa16.27■□□□□ 0.2
C4orf48-202ENST00000409860 SRSF12Q8WXF0 261 aaKnown RBP16.27■□□□□ 0.2
C4orf48-202ENST00000409860 FKBP11Q9NYL4 201 aa16.27■□□□□ 0.2
C4orf48-202ENST00000409860 ZNF580Q9UK33 172 aa16.27■□□□□ 0.2
C4orf48-202ENST00000409860 NSG2Q9Y328 171 aa16.27■□□□□ 0.2
C4orf48-202ENST00000409860 RNF114Q9Y508 228 aa16.27■□□□□ 0.2
C4orf48-202ENST00000409860 A0A0G2JRQ6 117 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 C15orf61A6NNL5 157 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 OR2B8PP59922 312 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 SSBP2P81877 361 aaPredicted RBP16.26■□□□□ 0.19
C4orf48-202ENST00000409860 IZUMO4Q1ZYL8 232 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 C10orf55Q5SWW7 151 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 STPG2Q8N412 459 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 SGMS2Q8NHU3 365 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 CHPT1Q8WUD6 406 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 GPR146Q96CH1 333 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 FAM103A1Q9BTL3 118 aaKnown RBP16.26■□□□□ 0.19
C4orf48-202ENST00000409860 GON7Q9BXV9 100 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 TMED3Q9Y3Q3 217 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 OR51B2Q9Y5P1 312 aa16.26■□□□□ 0.19
C4orf48-202ENST00000409860 TMEM267Q0VDI3 215 aaPredicted RBP16.25■□□□□ 0.19
C4orf48-202ENST00000409860 ECSCRQ19T08 205 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 NMSQ5H8A3 153 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 NOL4LQ96MY1 436 aaPredicted RBP16.25■□□□□ 0.19
C4orf48-202ENST00000409860 SPIN2AQ99865 258 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 SPIN2BQ9BPZ2 258 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 TMEM14BQ9NUH8 114 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 CACNG5Q9UF02 275 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 LINC00527Q9UJ94 153 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 FOXA2Q9Y261 457 aaPredicted RBP16.25■□□□□ 0.19
C4orf48-202ENST00000409860 FBXO7Q9Y3I1 522 aa16.25■□□□□ 0.19
C4orf48-202ENST00000409860 TRAV41A0A0B4J266 112 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 SNRPGP15A8MWD9 76 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 IFNA21P01568 189 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 OPN1MWP04001 364 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 HOXB5P09067 269 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 SULT1A3P0DMM9 295 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 SULT1A4P0DMN0 295 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 OPN1MW2P0DN77 364 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 OPN1MW3P0DN78 364 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 CRIP2P52943 208 aaPredicted RBP16.24■□□□□ 0.19
C4orf48-202ENST00000409860 SLC35B1P78383 322 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 OXA1LQ15070 435 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 AWAT1Q58HT5 328 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 THOC7Q6I9Y2 204 aaKnown RBP16.24■□□□□ 0.19
C4orf48-202ENST00000409860 C12orf45Q8N5I9 185 aaPredicted RBP16.24■□□□□ 0.19
C4orf48-202ENST00000409860 KLHDC1Q8N7A1 406 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 MINDY2Q8NBR6 621 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 OR1L8Q8NGR8 309 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 OR5B3Q8NH48 314 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 FYTTD1Q96QD9 318 aaKnown RBP16.24■□□□□ 0.19
C4orf48-202ENST00000409860 PDCD10Q9BUL8 212 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 WNT10AQ9GZT5 417 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 WSB1Q9Y6I7 421 aa16.24■□□□□ 0.19
C4orf48-202ENST00000409860 A0A0B4J293 547 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 MSGN1A6NI15 193 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 HAX1O00165 279 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 EGR2P11161 476 aaPredicted RBP16.23■□□□□ 0.19
C4orf48-202ENST00000409860 MYOD1P15172 320 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 GGNBP1Q5YKI7 109 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 UNQ5815/PRO19632Q6UWF5 114 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 CENPVQ7Z7K6 275 aaPredicted RBP16.23■□□□□ 0.19
C4orf48-202ENST00000409860 ZNF429Q86V71 674 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 UXS1Q8NBZ7 420 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 LFNGQ8NES3 379 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 TMEM68Q96MH6 324 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 QTRT1Q9BXR0 403 aaKnown RBP16.23■□□□□ 0.19
C4orf48-202ENST00000409860 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.23■□□□□ 0.19
C4orf48-202ENST00000409860 ZNF257Q9Y2Q1 563 aa16.23■□□□□ 0.19
C4orf48-202ENST00000409860 TEX50A0A1B0GTY4 177 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 A0A1B0GU03 582 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 PSMB11A5LHX3 300 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 PROK1P58294 105 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 SMCO1Q147U7 214 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 TATDN3Q17R31 274 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 Q6ZRM9 215 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 HINT2Q9BX68 163 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 COA4Q9NYJ1 87 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 CACFD1Q9UGQ2 172 aa16.22■□□□□ 0.19
C4orf48-202ENST00000409860 DBX1A6NMT0 343 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 G3V318 75 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 ADAP1O75689 374 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 TRAPPC2P0DI81 140 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 TRAPPC2BP0DI82 140 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 SLC25A6P12236 298 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 HSPE1P61604 102 aaKnown RBP16.21■□□□□ 0.19
C4orf48-202ENST00000409860 AKIRIN2Q53H80 203 aa16.21■□□□□ 0.19
C4orf48-202ENST00000409860 SRSF8Q9BRL6 282 aaKnown RBP16.21■□□□□ 0.19
C4orf48-202ENST00000409860 TEX22C9J3V5 150 aa16.2■□□□□ 0.18
C4orf48-202ENST00000409860 ST8SIA3O43173 380 aa16.2■□□□□ 0.18
C4orf48-202ENST00000409860 IFNA17P01571 189 aa16.2■□□□□ 0.18
C4orf48-202ENST00000409860 MRPL41Q8IXM3 137 aaKnown RBP16.2■□□□□ 0.18
C4orf48-202ENST00000409860 OR1S1Q8NH92 325 aa16.2■□□□□ 0.18
C4orf48-202ENST00000409860 NDUFA4L2Q9NRX3 87 aa16.2■□□□□ 0.18
C4orf48-202ENST00000409860 TNCP24821 2201 aa16.2■□□□□ 0.18
C4orf48-202ENST00000409860 PLXNB1O43157 2135 aa16.19■□□□□ 0.18
C4orf48-202ENST00000409860 A0A1W2PN81 502 aa16.19■□□□□ 0.18
C4orf48-202ENST00000409860 C7orf66A4D0T2 115 aa16.19■□□□□ 0.18
C4orf48-202ENST00000409860 HMX3A6NHT5 357 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms