RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 RPRMQ9NS64 109 aa15.37■□□□□ 0.05
USP39-202ENST00000409025 IFNA4P05014 189 aa15.36■□□□□ 0.05
USP39-202ENST00000409025 USF1P22415 310 aaPredicted RBP15.36■□□□□ 0.05
USP39-202ENST00000409025 NPY1RP25929 384 aa15.36■□□□□ 0.05
USP39-202ENST00000409025 CD1BP29016 333 aa15.36■□□□□ 0.05
USP39-202ENST00000409025 PRB3Q04118 309 aaPredicted RBP15.36■□□□□ 0.05
USP39-202ENST00000409025 TMEM41BQ5BJD5 291 aa15.36■□□□□ 0.05
USP39-202ENST00000409025 CARHSP1Q9Y2V2 147 aaKnown RBP15.36■□□□□ 0.05
USP39-202ENST00000409025 M0R1W7 72 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 SFTA3P0C7M3 94 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 PNKDQ8N490 385 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 ZNF709Q8N972 641 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 TMEM167AQ8TBQ9 72 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 VSIRQ9H7M9 311 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 A0A1B0GW64 132 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 C17orf112F2Z3M2 114 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 ENSAO43768 121 aaKnown RBP15.35■□□□□ 0.05
USP39-202ENST00000409025 OPN1MWP04001 364 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 OPN1MW2P0DN77 364 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 OPN1MW3P0DN78 364 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 MDKP21741 143 aaPredicted RBP15.35■□□□□ 0.05
USP39-202ENST00000409025 ELLP55199 621 aaPredicted RBP15.35■□□□□ 0.05
USP39-202ENST00000409025 ARF6P62330 175 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 RPL8P62917 257 aaKnown RBP15.35■□□□□ 0.05
USP39-202ENST00000409025 DLK1P80370 383 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 VMA21Q3ZAQ7 101 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 SVBPQ8N300 66 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 Q8N7P7 452 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 TMEM170AQ8WVE7 144 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 SCRT1Q9BWW7 348 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 NPCDR1Q9BY65 106 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 COMMD5Q9GZQ3 224 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 INSIG2Q9Y5U4 225 aa15.35■□□□□ 0.05
USP39-202ENST00000409025 PRSS46E5RG02 174 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 IGLV2-23P01705 113 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 LGALS7P47929 136 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 CCL20P78556 96 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 HNF4GQ14541 408 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 OR4P4Q8NGL7 312 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 KIAA1456Q9P272 454 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 WDR83OSQ9Y284 106 aa15.34■□□□□ 0.05
USP39-202ENST00000409025 TRAV1-1A0A0B4J248 108 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 SMCO3A2RU48 225 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 FAM157AC9JC47 383 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 C9JQL5 133 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 CA2P00918 260 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 SP5Q6BEB4 398 aaPredicted RBP15.33■□□□□ 0.05
USP39-202ENST00000409025 MOB3BQ86TA1 216 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 OR1L8Q8NGR8 309 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 RPEQ96AT9 228 aa15.33■□□□□ 0.05
USP39-202ENST00000409025 HRNRQ86YZ3 2850 aaPredicted RBP15.33■□□□□ 0.04
USP39-202ENST00000409025 IGHV3-72A0A0B4J1Y9 119 aa15.33■□□□□ 0.04
USP39-202ENST00000409025 IGHV1-3A0A0C4DH29 117 aa15.33■□□□□ 0.04
USP39-202ENST00000409025 OVOL3O00110 214 aa15.33■□□□□ 0.04
USP39-202ENST00000409025 MBP02144 154 aa15.33■□□□□ 0.04
USP39-202ENST00000409025 ATP5IP56385 69 aaPredicted RBP15.33■□□□□ 0.04
USP39-202ENST00000409025 MBD3L1Q8WWY6 194 aa15.33■□□□□ 0.04
USP39-202ENST00000409025 USP24Q9UPU5 2620 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 MPDU1O75352 247 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 PRB1P04280 392 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 PPT1P50897 306 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 ATRAIDQ6UW56 229 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 SMDT1Q9H4I9 107 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 SIRT7Q9NRC8 400 aa15.32■□□□□ 0.04
USP39-202ENST00000409025 RBFOX3A6NFN3 312 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 GUCA2BQ16661 112 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 FFAR4Q5NUL3 377 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 ACSM6Q6P461 480 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 OR11H6Q8NGC7 330 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 RCC1LQ96I51 464 aaKnown RBP15.31■□□□□ 0.04
USP39-202ENST00000409025 NDUFA4L2Q9NRX3 87 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 LY6LH3BQJ8 138 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 SLC25A17O43808 307 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 IGHV2-5P01817 119 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 M6PRP20645 277 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 PRTN3P24158 256 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 BTN1A1Q13410 526 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 ZNF726P1Q15940 193 aa15.31■□□□□ 0.04
USP39-202ENST00000409025 NKX6-2Q9C056 277 aaPredicted RBP15.31■□□□□ 0.04
USP39-202ENST00000409025 LRBAP50851 2863 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 CACNA1BQ00975 2339 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 A0A1W2PN81 502 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 HTR1DP28221 377 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 CHRNA7P36544 502 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 ZNF787Q6DD87 383 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 LCN15Q6UWW0 184 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 C1orf122Q6ZSJ8 110 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 KIR3DL3Q8N743 410 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 RITA1Q96K30 269 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 BBC3Q96PG8 261 aaPredicted RBP15.3■□□□□ 0.04
USP39-202ENST00000409025 ZNF430Q9H8G1 570 aaPredicted RBP15.3■□□□□ 0.04
USP39-202ENST00000409025 NPVFQ9HCQ7 196 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 KPTNQ9Y664 436 aa15.3■□□□□ 0.04
USP39-202ENST00000409025 SOX15O60248 233 aa15.29■□□□□ 0.04
USP39-202ENST00000409025 ERHP84090 104 aaKnown RBP15.29■□□□□ 0.04
USP39-202ENST00000409025 C2orf83Q53S99 150 aa15.29■□□□□ 0.04
USP39-202ENST00000409025 TEX45Q8NA69 505 aa15.29■□□□□ 0.04
USP39-202ENST00000409025 RARRES2Q99969 163 aa15.29■□□□□ 0.04
USP39-202ENST00000409025 SLC39A9Q9NUM3 307 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms