RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TMEM171Q8WVE6 324 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 FGF11Q92914 225 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 CLEC7AQ9BXN2 247 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 ZNF319Q9P2F9 582 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 SDK2Q58EX2 2172 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 HEATR5BQ9P2D3 2071 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 IGKV1D-42A0A075B6H8 117 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 IGHV3-43A0A0B4J1X8 118 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 ZIC3O60481 467 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 SAP30O75446 220 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 SPINK8P0C7L1 97 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 IGHV3-43DP0DP04 118 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 UCP1P25874 307 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RBM11P57052 281 aaKnown RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RBX1P62877 108 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RPL8P62917 257 aaKnown RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 FNDC7Q5VTL7 733 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 C16orf47Q6ZP98 133 aaPredicted RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 BHLHA15Q7RTS1 189 aaPredicted RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 PDPNQ86YL7 162 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 C5orf17Q8NAS9 161 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 LSM10Q969L4 123 aaKnown RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 C8orf44Q96CB5 159 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 POM121L2Q96KW2 1035 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 SGK494Q96LW2 274 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 KLHDC3Q9BQ90 382 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RTL8AQ9BWD3 113 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 MRPL13Q9BYD1 178 aaKnown RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RNASE7Q9H1E1 156 aaKnown RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 TSSC4Q9Y5U2 329 aaPredicted RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 C4orf51C9J302 202 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 IGHV3-13P01766 116 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 IGHV3-7P01780 117 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 ZNF32P17041 273 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 ORM2P19652 201 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 OR10J3Q5JRS4 329 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 CDCP2Q5VXM1 449 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 LINC00696Q6ZRV3 163 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RTN4RL2Q86UN3 420 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 STPG3Q8N7X2 389 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 ZBTB34Q8NCN2 500 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 SSBP4Q9BWG4 385 aaPredicted RBP4.98□□□□□ -1.61
HDAC9-203ENST00000406072 NPVFQ9HCQ7 196 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 RARRES3Q9UL19 164 aa4.98□□□□□ -1.61
HDAC9-203ENST00000406072 CACNA1GO43497 2377 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 DOPEY2Q9Y3R5 2298 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 IGLV3-12A0A075B6K2 115 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 IGKV1D-8A0A087WSZ0 117 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TRAV8-6A0A0B4J262 113 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 DNPH1O43598 174 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 ZG16O60844 167 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 MPDU1O75352 247 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 DXOO77932 396 aaKnown RBP4.97□□□□□ -1.61
HDAC9-203ENST00000406072 APOMO95445 188 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 ID3Q02535 119 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TEX43Q6ZNM6 134 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 LHFPL1Q86WI0 220 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 Q96M66 194 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 GNB1LQ9BYB4 327 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 SHANK1Q9Y566 2161 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 H7C2G1 150 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 MT-CO3P00414 261 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 IL4P05112 153 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 SP1P08047 785 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 GDF1P27539 372 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 GCHFRP30047 84 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 GNG3P63215 75 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 FAM71F2Q6NXP2 309 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TMEM144Q7Z5S9 345 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 RPP25LQ8N5L8 163 aaKnown RBP4.97□□□□□ -1.61
HDAC9-203ENST00000406072 C10orf35Q96D05 121 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 C18orf12Q96KH6 178 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 NPCDR1Q9BY65 106 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 B4GALT7Q9UBV7 327 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TIMM9Q9Y5J7 89 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TMSB15BA0A087X1C1 80 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 FKBP2P26885 142 aaKnown RBP4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TIMP3P35625 211 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 RBPJQ06330 500 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TFF3Q07654 80 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 TMEM249Q2WGJ8 235 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 GAGE13Q4V321 117 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 SAXO1Q8IYX7 474 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 SLC25A45Q8N413 288 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 AGBL5Q8NDL9 886 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 OR2M3Q8NG83 312 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 RSPO3Q9BXY4 272 aaPredicted RBP4.97□□□□□ -1.61
HDAC9-203ENST00000406072 FGF21Q9NSA1 209 aa4.97□□□□□ -1.61
HDAC9-203ENST00000406072 ZNF256Q9Y2P7 627 aaPredicted RBP4.97□□□□□ -1.61
HDAC9-203ENST00000406072 IGHV1OR21-1A0A087WYE8 117 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 TMEM30CPA0ZSE6 113 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 FAM181BA6NEQ2 426 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 NCBP2LA6PVI3 153 aaKnown RBP4.96□□□□□ -1.61
HDAC9-203ENST00000406072 DEFA4P12838 97 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 ZNF83P51522 516 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 GAGE2BQ13066 116 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 GAGE2EQ4V326 116 aa4.96□□□□□ -1.61
HDAC9-203ENST00000406072 KRTCAP3Q53RY4 240 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms