RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR5D18Q8NGL1 313 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 OR11L1Q8NGX0 322 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 OR2AE1Q8NHA4 323 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 TRIB1Q96RU8 372 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 GPER1Q99527 375 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 VAMP8Q9BV40 100 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 VSIRQ9H7M9 311 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 PLEKHJ1Q9NW61 149 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 OTOGLQ3ZCN5 2332 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CELSR3Q9NYQ7 3312 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 C3orf85A0A1B0GTC6 90 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 GRIFINA4D1Z8 144 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CEBPZOSA8MTT3 80 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 KIAA1324LA8MWY0 1029 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 TRAPPC2LH3BP13 241 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 C15orf65H3BRN8 121 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 VENTXO95231 258 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 NGFP01138 241 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 AADACP22760 399 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 IL3RAP26951 378 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 PLA2G5P39877 138 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CA7P43166 264 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 MEF2BQ02080 365 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 PAX2Q02962 417 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 TESK1Q15569 626 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CXorf66Q5JRM2 361 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 VWA1Q6PCB0 445 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 WDR82Q6UXN9 313 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 Q8N976 141 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 BTF3L4Q96K17 158 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 SPIN2AQ99865 258 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 SPIN2BQ9BPZ2 258 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 ZNF430Q9H8G1 570 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 MANBALQ9NQG1 85 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 WDFY3Q8IZQ1 3526 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 DSCAML1Q8TD84 2053 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 IGKV1-6A0A0C4DH72 117 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 HMGB3O15347 200 aaKnown RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 MPPED1O15442 326 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 IFNA1P01562 189 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CD99P14209 185 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CDKN1AP38936 164 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 TPPP2P59282 170 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 YPEL3P61236 119 aaPredicted RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 SERF2P84101 59 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 KLK9Q2XQG4 91 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 PVRIGQ6DKI7 326 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 KCNIP4Q6PIL6 250 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 SELENOHQ8IZQ5 122 aaKnown RBP4.45□□□□□ -1.7
VPS41-203ENST00000395969 OR4B1Q8NGF8 309 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 C8orf46Q8TAG6 207 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 CMTM2Q8TAZ6 248 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 IGFBPL1Q8WX77 278 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 PARLQ9H300 379 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 KLK9Q9UKQ9 250 aa4.45□□□□□ -1.7
VPS41-203ENST00000395969 HCFC1P51610 2035 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 TRIOO75962 3097 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 MED13Q9UHV7 2174 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 IGHV2-70DA0A0C4DH43 119 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 OOEPA6NGQ2 149 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 DLL1O00548 723 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 HS3ST1O14792 307 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 SH2D1BO14796 132 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 PPYP01298 95 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 C1QTNF9P0C862 333 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 BMP5P22003 454 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 FOXF2Q12947 444 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 TMEM249Q2WGJ8 235 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 STUMQ69YW2 141 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 LCN15Q6UWW0 184 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 LINC00311Q8N616 119 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 GCSAMQ8N6F7 178 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 SLC25A40Q8TBP6 338 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 TMEM190Q8WZ59 177 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 OR2W1Q9Y3N9 320 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 TRAPPC1Q9Y5R8 145 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 A0A0G2JNJ9 132 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 FNDC10F2Z333 226 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 F6UZH7 168 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 CHST1O43916 411 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 GNRHRP30968 328 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 PPOXP50336 477 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 ATP5IP56385 69 aaPredicted RBP4.44□□□□□ -1.7
VPS41-203ENST00000395969 FXYD4P59646 89 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 RPL19P84098 196 aaKnown RBP4.44□□□□□ -1.7
VPS41-203ENST00000395969 MEF2CQ06413 473 aaPredicted RBP4.44□□□□□ -1.7
VPS41-203ENST00000395969 TFF3Q07654 80 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 KLRB1Q12918 225 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 FOXL1Q12952 345 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 TMEM41BQ5BJD5 291 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 OR52E5Q8NH55 327 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 WFDC12Q8WWY7 111 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 RSG1Q9BU20 258 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 CLEC5AQ9NY25 188 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 Q9UFV3 132 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 JPT1Q9UK76 154 aa4.44□□□□□ -1.7
VPS41-203ENST00000395969 C22orf46C9J442 243 aa4.43□□□□□ -1.7
VPS41-203ENST00000395969 HSBP1L1C9JCN9 74 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms