RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ZNF138P52744 262 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 GMPPAQ96IJ6 420 aaPredicted RBP14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 MS4A5Q9H3V2 200 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TMSB15BA0A087X1C1 80 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 GCSHP23434 173 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 FBXW9Q5XUX1 488 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 WFDC3Q8IUB2 231 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 PEF1Q9UBV8 284 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 EML5Q05BV3 1969 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 KIAA1549Q9HCM3 1950 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IGKV1-6A0A0C4DH72 117 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 C7orf71A4D174 169 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 ZNF83P51522 516 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SAMD13Q5VXD3 122 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 LSM10Q969L4 123 aaKnown RBP14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SRXN1Q9BYN0 137 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 MMP17Q9ULZ9 603 aa14.31□□□□□ -0.12
TRAF3IP1-202ENST00000391993 DYSFO75923 2080 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IGHV3-21A0A0B4J1V1 117 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SAP30O75446 220 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 LINC00869P0C866 280 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 EAF1Q96JC9 268 aaPredicted RBP14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 COL4A6Q14031 1691 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 LMO7DNF2Z398 122 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 RAC1P63000 192 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 MIR17HGQ75NE6 70 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 hCG_38984A0A1B0GV85 526 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 FOXH1O75593 365 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 NPPCP23582 126 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 CDKN1BP46527 198 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 RBX1P62877 108 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TMEM240Q5SV17 173 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 Q8NFD4 153 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SPSB4Q96A44 273 aa14.3□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IGLL1P15814 213 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SSTR5P35346 364 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 OR1C1Q15619 314 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 LHFPL4Q7Z7J7 247 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 VWCEQ96DN2 955 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IGHV2OR16-5A0A0B4J2B6 119 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TEX50A0A1B0GTY4 177 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 HBZP02008 142 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SELENOVP59797 346 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TUSC5Q8IXB3 177 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 DCTN5Q9BTE1 182 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 NPVFQ9HCQ7 196 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 OBP2AQ9NY56 170 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TIAF1O95411 115 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 RAC3P60763 192 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 RTL8BQ17RB0 113 aa14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SEPSECSQ9HD40 501 aaKnown RBP14.29□□□□□ -0.12
TRAF3IP1-202ENST00000391993 ENSAO43768 121 aaKnown RBP14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IFI6P09912 130 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TRAV30A0A087WSZ9 112 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IGKV3D-11A0A0A0MRZ8 115 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 ARF6P62330 175 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 CEACAM21Q3KPI0 293 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 AGMATQ9BSE5 352 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 CLEC1BQ9P126 229 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 MT-CO3P00414 261 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 CTSSP25774 331 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 FOLR3P41439 243 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 KCNMB1Q16558 191 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 PYGO2Q9BRQ0 406 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 ZNF391Q9UJN7 358 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 MED13Q9UHV7 2174 aa14.28□□□□□ -0.12
TRAF3IP1-202ENST00000391993 A6NDN8 102 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TMEM238C9JI98 176 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 FKBP2P26885 142 aaKnown RBP14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 OR1N2Q8NGR9 330 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TSKUQ8WUA8 353 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TMEM167BQ9NRX6 74 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IL36GQ9NZH8 169 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 B4GALT7Q9UBV7 327 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 PLXNA2O75051 1894 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 SYNGR3O43761 229 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 TCF24Q7RTU0 167 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 LINC00479Q96M42 142 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 OR2V2Q96R30 315 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 CDC42EP3Q9UKI2 254 aa14.27□□□□□ -0.12
TRAF3IP1-202ENST00000391993 IGFBP2P18065 325 aa14.27□□□□□ -0.13
TRAF3IP1-202ENST00000391993 RPL15P61313 204 aaKnown RBP14.27□□□□□ -0.13
TRAF3IP1-202ENST00000391993 ABHD17BQ5VST6 288 aa14.27□□□□□ -0.13
TRAF3IP1-202ENST00000391993 TCFL5Q9UL49 500 aa14.27□□□□□ -0.13
TRAF3IP1-202ENST00000391993 YTHDF2Q9Y5A9 579 aaKnown RBP14.27□□□□□ -0.13
TRAF3IP1-202ENST00000391993 HTTP42858 3142 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 CIDEAO60543 219 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 STRADBQ9C0K7 418 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 WNT9BO14905 357 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 CD27P26842 260 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 HOXA4Q00056 320 aaPredicted RBP14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 PSG9Q00887 426 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 WFDC12Q8WWY7 111 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 TIMM9Q9Y5J7 89 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 IGHV1-69-2A0A0G2JMI3 117 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 NPIPB13A6NJU9 1138 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 NPIPB4C9JG80 1138 aa14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 RPL30P62888 115 aaKnown RBP14.26□□□□□ -0.13
TRAF3IP1-202ENST00000391993 OR1L4Q8NGR5 311 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms