RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MALRD1Q5VYJ5 2156 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 CLN5O75503 358 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 CTRB1P17538 263 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 CEACAM8P31997 349 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-202ENST00000377797 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
TCOF1-202ENST00000377797 ADIPOQQ15848 244 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 CTRB2Q6GPI1 263 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 PERPQ96FX8 193 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 ID3Q02535 119 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 IGFL2Q6UWQ7 119 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 C20orf204Q6ZNR8 217 aa12.09□□□□□ -0.47
TCOF1-202ENST00000377797 FOXH1O75593 365 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 GALR1P47211 349 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 LCN2P80188 198 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 OR8I2Q8N0Y5 310 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 ST6GALNAC3Q8NDV1 305 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 TMEM204Q9BSN7 226 aa12.08□□□□□ -0.47
TCOF1-202ENST00000377797 WDR61Q9GZS3 305 aaKnown RBP12.08□□□□□ -0.47
TCOF1-202ENST00000377797 IGF2-ASQ6U949 168 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 CCL19Q99731 98 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 CORTO00230 105 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 SELENOTP62341 195 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 COQ2Q96H96 371 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
TCOF1-202ENST00000377797 SUMO1P63165 101 aaKnown RBP12.08□□□□□ -0.48
TCOF1-202ENST00000377797 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
TCOF1-202ENST00000377797 AURKAIP1Q9NWT8 199 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-202ENST00000377797 CRIM1Q9NZV1 1036 aa12.08□□□□□ -0.48
TCOF1-202ENST00000377797 SPINK4O60575 86 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 CA2P00918 260 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 MEF2BQ02080 365 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-202ENST00000377797 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 STXBP6Q8NFX7 210 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 TLN1Q9Y490 2541 aaKnown RBP12.07□□□□□ -0.48
TCOF1-202ENST00000377797 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 M0QZ24 198 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 CHEK1O14757 476 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 PHOX2AO14813 284 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 ZNF672Q499Z4 452 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-202ENST00000377797 PCSK4Q6UW60 755 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 TRBV6-6A0A0A6YYG2 114 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 HYPMO75409 117 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 PAX5Q02548 391 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 IGKV1D-17A0A075B6S4 117 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 PDE6DO43924 150 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 PLAUP00749 431 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
TCOF1-202ENST00000377797 TMEM37Q8WXS4 190 aa12.07□□□□□ -0.48
TCOF1-202ENST00000377797 RPUSD1Q9UJJ7 312 aaKnown RBP12.07□□□□□ -0.48
TCOF1-202ENST00000377797 DNM1P46Q6ZS02 220 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 NEUROG1Q92886 237 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 ARL16Q0P5N6 197 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 OR5I1Q13606 314 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 Q6ZR03 302 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-202ENST00000377797 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 NOTCH2Q04721 2471 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 ZNF430Q9H8G1 570 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-202ENST00000377797 IGHV3OR16-10A0A075B7F0 116 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 NPIPB3Q92617 1050 aa12.06□□□□□ -0.48
TCOF1-202ENST00000377797 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 GNLYP22749 145 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 PPOXP50336 477 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 RANP62826 216 aaKnown RBP12.05□□□□□ -0.48
TCOF1-202ENST00000377797 Q6ZS49 121 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 SLC16A13Q7RTY0 426 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 OR4D5Q8NGN0 318 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 TMEM18Q96B42 140 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 RARRES2Q99969 163 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 CEP295Q9C0D2 2601 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 H0Y8G0 127 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 HELTA6NFD8 242 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 HSPB1P04792 205 aaKnown RBP12.05□□□□□ -0.48
TCOF1-202ENST00000377797 OR10G8Q8NGN5 311 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 TMEM133Q9H2Q1 129 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 FAM74A3Q4VXF1 159 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 OR1L6Q8NGR2 347 aa12.05□□□□□ -0.48
TCOF1-202ENST00000377797 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
TCOF1-202ENST00000377797 CEACAM4O75871 244 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 CRYBA1P05813 215 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 THBDP07204 575 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 RPL30P62888 115 aaKnown RBP12.04□□□□□ -0.48
TCOF1-202ENST00000377797 GAMTQ14353 236 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
TCOF1-202ENST00000377797 ZNF98A6NK75 572 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 B4DEV8 164 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
TCOF1-202ENST00000377797 FXYD3Q14802 87 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 RNF151Q2KHN1 245 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 LRRC75BQ2VPJ9 315 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 HLA-DRB5Q30154 266 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms