RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 USF1P22415 310 aaPredicted RBP17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 GNG4P50150 75 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 CCL7P80098 99 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 MRPL49Q13405 166 aaKnown RBP17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 SPATA46Q5T0L3 261 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 SPATA31B1PQ5VZV4 182 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 TDHQ8IZJ6 230 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 TNFRSF14Q92956 283 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 CLEC5AQ9NY25 188 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 ARL2-SNX15V9GYD0 113 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 IGHV5-10-1A0A0J9YXX1 117 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 TMEM238LA0A1B0GVL6 79 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 OR10J4P0C629 311 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 FER1L6-AS1Q8NA97 138 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 SELENOKQ9Y6D0 94 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 OR4C46A6NHA9 309 aa17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 FKBP2P26885 142 aaKnown RBP17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 OPRK1P41145 380 aa17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 PDLIM3Q53GG5 364 aaPredicted RBP17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 SPACA3Q8IXA5 215 aa17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 CEACAM21Q3KPI0 293 aa17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 RNASEKQ6P5S7 137 aaKnown RBP17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 MGST2Q99735 147 aa17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 ST20Q9HBF5 79 aa17.1■□□□□ 0.33
TMEFF1-201ENST00000374879 HELTA6NFD8 242 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 G3V4G9 280 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 CD5LO43866 347 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 PAX2Q02962 417 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 TREML4Q6UXN2 200 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 C12orf54Q6X4T0 127 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 NINJ1Q92982 152 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 CLUHP3Q96NS8 147 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 CHCHD2Q9Y6H1 151 aaPredicted RBP17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 G3V3Y1 287 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 J3QR06 171 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 DKK1O94907 266 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 GOSR1O95249 250 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 CD46P15529 392 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 CCNOP22674 350 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 ZNF808Q8N4W9 903 aaPredicted RBP17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 C1QTNF5Q9BXJ0 243 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 SRXN1Q9BYN0 137 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 TNFRSF19Q9NS68 423 aa17.09■□□□□ 0.33
TMEFF1-201ENST00000374879 CA1P00915 261 aaPredicted RBP17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 SLC25A34Q6PIV7 304 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 ZNF841Q6ZN19 808 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 TMEM45BQ96B21 275 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 OSTCQ9NRP0 149 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 SERTAD4Q9NUC0 356 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 CLCF1Q9UBD9 225 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 TRAPPC2LQ9UL33 140 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 CACNA1EQ15878 2313 aa17.08■□□□□ 0.33
TMEFF1-201ENST00000374879 RAB29O14966 203 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 OR7C2O60412 319 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 CA6P23280 308 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 CRYBB3P26998 211 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 BRWD1-AS2P59051 145 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 ARF6P62330 175 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 ASPHD1Q5U4P2 390 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 OR1B1Q8NGR6 318 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 OR4S2Q8NH73 311 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 SSMEM1Q8WWF3 244 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 C5orf30Q96GV9 206 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 FOXB1Q99853 325 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 TMEM70Q9BUB7 260 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 GGTLC1Q9BX51 225 aa17.08■□□□□ 0.32
TMEFF1-201ENST00000374879 A0A0J9YW62 118 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 SMIM27A0A1W2PRY6 76 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 C17orf98A8MV24 154 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 CELA2AP08217 269 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 FAM53AQ6NSI3 398 aaPredicted RBP17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 PEF1Q9UBV8 284 aaKnown RBP17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 LY6G6EA0A0G2JKS1 128 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 NEURL1O76050 574 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 CGAP01215 116 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 RPL8P62917 257 aaKnown RBP17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 CEACAM16Q2WEN9 425 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 ZNF331Q9NQX6 463 aaPredicted RBP17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 U3KQA8 63 aa17.07■□□□□ 0.32
TMEFF1-201ENST00000374879 CCL2P13500 99 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 H2BFWTQ7Z2G1 175 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 OR2T6Q8NHC8 308 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 CPT1CQ8TCG5 803 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 MS4A5Q9H3V2 200 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 KMT2EQ8IZD2 1858 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 A0A087X0K7 114 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 SLC23A3Q6PIS1 610 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 S100A7AQ86SG5 101 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 DUSP23Q9BVJ7 150 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 FSCN3Q9NQT6 498 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 OCIAD1Q9NX40 245 aa17.06■□□□□ 0.32
TMEFF1-201ENST00000374879 GAGE10A6NGK3 116 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 SH2D7A6NKC9 451 aaPredicted RBP17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 CDIPTO14735 213 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 APOBEC3AP31941 199 aaPredicted RBP17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 GPR6P46095 362 aaPredicted RBP17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 VWA1Q6PCB0 445 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 COMMD5Q9GZQ3 224 aa17.05■□□□□ 0.32
TMEFF1-201ENST00000374879 IZUMO1RA6ND01 250 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms