RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 LYG2Q86SG7 212 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 RBMXL1Q96E39 390 aaKnown RBP10.29□□□□□ -0.76
GJB1-202ENST00000374022 ZNF48Q96MX3 618 aaPredicted RBP10.29□□□□□ -0.76
GJB1-202ENST00000374022 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
GJB1-202ENST00000374022 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 COLCA2A8K830 154 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 RBFOX2O43251 390 aaKnown RBP eCLIP10.29□□□□□ -0.76
GJB1-202ENST00000374022 CLN5O75503 358 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 SFT2D2O95562 160 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 IFNA2P01563 188 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 IGKV1D-33P01593 117 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 IGKV1-33P01594 117 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 IGKV1-16P04430 117 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 SRD5A1P18405 259 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 CD24P25063 80 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 GPX4P36969 197 aaPredicted RBP10.29□□□□□ -0.76
GJB1-202ENST00000374022 DYNLT3P51808 116 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 SNRPEP62304 92 aaKnown RBP10.29□□□□□ -0.76
GJB1-202ENST00000374022 SCGB2A2Q13296 93 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 OR4S2Q8NH73 311 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 CD300LFQ8TDQ1 290 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 SSX3Q99909 188 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
GJB1-202ENST00000374022 FAM90A9PA6NNJ1 464 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 SNRNP70P08621 437 aaKnown RBP10.28□□□□□ -0.76
GJB1-202ENST00000374022 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 UCP1P25874 307 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 SRPXP78539 464 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 CYCSP99999 105 aaKnown RBP10.28□□□□□ -0.76
GJB1-202ENST00000374022 TMEM187Q14656 261 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 ZNF585BQ52M93 769 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 IL34Q6ZMJ4 242 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 CBLN2Q8IUK8 224 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 C15orf54Q8N8G6 183 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 CASTOR1Q8WTX7 329 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 PRR13Q9NZ81 148 aa10.28□□□□□ -0.76
GJB1-202ENST00000374022 A0A0B4J2A0 478 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 DUS4LO95620 317 aaKnown RBP10.27□□□□□ -0.76
GJB1-202ENST00000374022 SERPINE2P07093 398 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 LPAR6P43657 344 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 HES1Q14469 280 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 FBLN7Q53RD9 439 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 DNLZQ5SXM8 178 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 RBMS3Q6XE24 437 aaKnown RBP10.27□□□□□ -0.76
GJB1-202ENST00000374022 ARL6IP6Q8N6S5 226 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 INO80EQ8NBZ0 244 aaPredicted RBP10.27□□□□□ -0.76
GJB1-202ENST00000374022 OR4C13Q8NGP0 309 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 MITD1Q8WV92 249 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 FLYWCH2Q96CP2 140 aaKnown RBP10.27□□□□□ -0.76
GJB1-202ENST00000374022 ZNF471Q9BX82 626 aaPredicted RBP10.27□□□□□ -0.76
GJB1-202ENST00000374022 PRDM13Q9H4Q3 707 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 SHPKQ9UHJ6 478 aa10.27□□□□□ -0.76
GJB1-202ENST00000374022 C1orf196B1AJZ1 125 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 H3BUX3 64 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 S1PR2O95136 353 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 HPRT1P00492 218 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 MOSP00540 346 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 FAM106CPP0CH98 169 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 TPT1P13693 172 aaKnown RBP10.27□□□□□ -0.77
GJB1-202ENST00000374022 EBI3Q14213 229 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 SMCO1Q147U7 214 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 TMEM177Q53S58 311 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 Q6YL49 198 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 THNSL2Q86YJ6 484 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 SIGLECL1Q8N7X8 197 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 PIFOQ8TCI5 191 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 EAF1Q96JC9 268 aaPredicted RBP10.27□□□□□ -0.77
GJB1-202ENST00000374022 HARBI1Q96MB7 349 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 PHB2Q99623 299 aa10.27□□□□□ -0.77
GJB1-202ENST00000374022 RAB4BP61018 213 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 RPS16P62249 146 aaKnown RBP10.26□□□□□ -0.77
GJB1-202ENST00000374022 PEA15Q15121 130 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 ANKRD55Q3KP44 614 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
GJB1-202ENST00000374022 SAT2Q96F10 170 aaPredicted RBP10.26□□□□□ -0.77
GJB1-202ENST00000374022 RITA1Q96K30 269 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 TMPRSS5Q9H3S3 457 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 PLEKHA2Q9HB19 425 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 TEP1Q99973 2627 aaKnown RBP10.26□□□□□ -0.77
GJB1-202ENST00000374022 TNCP24821 2201 aa10.26□□□□□ -0.77
GJB1-202ENST00000374022 PLXNB1O43157 2135 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 CDS2O95674 445 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 IGKV1-39P01597 117 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 IGHV4-59P01825 116 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 IGKV1D-39P04432 117 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 TMEM11P17152 192 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 IER3P46695 156 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 HNF4GQ14541 408 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 LBHQ53QV2 105 aaPredicted RBP10.25□□□□□ -0.77
GJB1-202ENST00000374022 TMEM268Q5VZI3 342 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 Q8N6K4 173 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 C2CD4CQ8TF44 421 aa10.25□□□□□ -0.77
GJB1-202ENST00000374022 PPP1R1CQ8WVI7 109 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms