RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PCSK4Q6UW60 755 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 GPR61Q9BZJ8 451 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 TP53BP1Q12888 1972 aaPredicted RBP10□□□□□ -0.81
DEPDC1-201ENST00000370966 TRBV9A0A0B4J1U6 114 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 CD99P14209 185 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 RAB9AP51151 201 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 TMEM78Q5T7P6 136 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 A0A0A6YYD4 124 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 TMEM189A5PLL7 270 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 SNRPCP09234 159 aaKnown RBP10□□□□□ -0.81
DEPDC1-201ENST00000370966 ARF6P62330 175 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 LCN2P80188 198 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 C9orf106Q8NAJ2 232 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 FAM57AQ8TBR7 257 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 NABP1Q96AH0 204 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 WNK2Q9Y3S1 2297 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 IGKV1D-13A0A0B4J2D9 117 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 IGKV1-13P0DP09 117 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 ZNF525Q8N782 197 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 A0A1B0GV90 55 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 FGF16O43320 207 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 ID1P41134 155 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 SRSF7Q16629 238 aaKnown RBP eCLIP9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 SPANXN1Q5VSR9 72 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 ZCCHC14Q8WYQ9 949 aaKnown RBP9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 TUBA4BQ9H853 241 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 A0A1W2PS18 150 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 IL6RP08887 468 aaPredicted RBP9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 TRGC1P0CF51 173 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 Q1RN00 199 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 LYRM7Q5U5X0 104 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 CYB5R2Q6BCY4 276 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 UNQ5815/PRO19632Q6UWF5 114 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 CACNG8Q8WXS5 425 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 YPEL1O60688 119 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 PMCHL1Q16048 86 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 GGNQ86UU5 652 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 YPEL2Q96QA6 119 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 METTL26Q96S19 204 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 IFI27L2Q9H2X8 130 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 DCAF16Q9NXF7 216 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 RABAC1Q9UI14 185 aa9.99□□□□□ -0.81
DEPDC1-201ENST00000370966 LOC105371242A0A075B767 164 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 A0A087WWC5 75 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 CELA3BP08861 270 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 PPOXP50336 477 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 OR4A47Q6IF82 309 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 IGKV3-7A0A075B6H7 116 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 CSRP1P21291 193 aaKnown RBP9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 FCGR2BP31994 310 aaPredicted RBP9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 GPX4P36969 197 aaPredicted RBP9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 KIR2DL2P43627 348 aaPredicted RBP9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 LOXL3P58215 753 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 ZNF497Q6ZNH5 498 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 RBPMS2Q6ZRY4 209 aaKnown RBP9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 LINC00312Q9Y6C7 94 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 TRAV24A0A0B4J272 114 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 RBFOX2O43251 390 aaKnown RBP eCLIP9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 HERVK_113P61574 105 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 OR4B1Q8NGF8 309 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 MYOZ3Q8TDC0 251 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 KLHDC3Q9BQ90 382 aa9.98□□□□□ -0.81
DEPDC1-201ENST00000370966 THADAQ6YHU6 1953 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 NPIPB11E5RHQ5 1161 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 RPS20P60866 119 aaKnown RBP9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 KLRB1Q12918 225 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 TMEM177Q53S58 311 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 IGKV1D-8A0A087WSZ0 117 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 IGKV1-12A0A0C4DH73 117 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 IGKV1D-12P01611 117 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 SCGB1C2P0DMR2 95 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 GFRA1P56159 465 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 C17orf100A8MU93 164 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 AMY1AP04745 511 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 GLRX5Q86SX6 157 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 PNKDQ8N490 385 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 MRPL37Q9BZE1 423 aaKnown RBP9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 PINLYPA6NC86 204 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 RRHO14718 337 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 PSG9Q00887 426 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 OR8A1Q8NGG7 326 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 CLDND2Q8NHS1 167 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 FGFBP3Q8TAT2 258 aa9.97□□□□□ -0.81
DEPDC1-201ENST00000370966 IFITM10A6NMD0 228 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 WDR82Q6UXN9 313 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 DCTN5Q9BTE1 182 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 DPM3Q9P2X0 92 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 PTPRDP23468 1912 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 SNCGO76070 127 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 RNF224P0DH78 156 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 FXYD3Q14802 87 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 ZNF124Q15973 351 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms