RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RELNP78509 3460 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 E7EQL1 145 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 TNFRSF13BO14836 293 aaPredicted RBP11.49□□□□□ -0.57
USF1-202ENST00000368020 IGHV3-7P01780 117 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 OPRK1P41145 380 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 LINC00311Q8N616 119 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 CCL17Q92583 94 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 MALSU1Q96EH3 234 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 C20orf24Q9BUV8 137 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 BET1LQ9NYM9 111 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 LRRK2Q5S007 2527 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 TRBV23-1A0A0A0MS06 115 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 SMCO3A2RU48 225 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 SEC14L6B5MCN3 397 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 OR2C1O95371 312 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 IFNA4P05014 189 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 NPY1RP25929 384 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 CEBPGP53567 150 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
USF1-202ENST00000368020 RAB31Q13636 194 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 SPINK9Q5DT21 86 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 DMRTC2Q8IXT2 367 aaPredicted RBP11.48□□□□□ -0.57
USF1-202ENST00000368020 VKORC1L1Q8N0U8 176 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 OR13D1Q8NGV5 346 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
USF1-202ENST00000368020 UBR5O95071 2799 aaPredicted RBP11.48□□□□□ -0.57
USF1-202ENST00000368020 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
USF1-202ENST00000368020 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 A0A1W2PPE3 182 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
USF1-202ENST00000368020 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 CDC34P49427 236 aaPredicted RBP11.47□□□□□ -0.57
USF1-202ENST00000368020 OR4A5Q8NH83 315 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 NPVFQ9HCQ7 196 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 TMEM242Q9NWH2 141 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 DCAF16Q9NXF7 216 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 ADGRG4Q8IZF6 3080 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 ABCA4P78363 2273 aa11.47□□□□□ -0.57
USF1-202ENST00000368020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.46□□□□□ -0.57
USF1-202ENST00000368020 PRSS46E5RG02 174 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 UPK2O00526 184 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 IGKV1D-33P01593 117 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 IGKV1-33P01594 117 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 RAB5AP20339 215 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 IL3RAP26951 378 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 AKR1C3P42330 323 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 FGF8P55075 233 aaPredicted RBP11.46□□□□□ -0.57
USF1-202ENST00000368020 PRCDQ00LT1 54 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 SSX7Q7RTT5 188 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 VSTM2AQ8TAG5 236 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 TXNDC17Q9BRA2 123 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 PCGF1Q9BSM1 259 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 SLC25A22Q9H936 323 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 OR51B2Q9Y5P1 312 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 ROS1P08922 2347 aa11.46□□□□□ -0.57
USF1-202ENST00000368020 A0A087X0M5 115 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 A0A1B0GX30 115 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 A0A1W2PPH5 198 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 ZNF137PP52743 207 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 TREML4Q6UXN2 200 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 C1orf229Q6ZS94 237 aaPredicted RBP11.46□□□□□ -0.58
USF1-202ENST00000368020 PDPNQ86YL7 162 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 TGIF2LYQ8IUE0 185 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.58
USF1-202ENST00000368020 TNFRSF14Q92956 283 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 RAB24Q969Q5 203 aa11.46□□□□□ -0.58
USF1-202ENST00000368020 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 J3QR06 171 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 DVL1O14640 695 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 MMP23AO75900 390 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 KBTBD11O94819 623 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 TMEM177Q53S58 311 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 TEPPQ6URK8 271 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 C1QL4Q86Z23 238 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 OR10X1Q8NGY0 326 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 CTDSP1Q9GZU7 261 aa11.45□□□□□ -0.58
USF1-202ENST00000368020 KLF2Q9Y5W3 355 aaPredicted RBP11.45□□□□□ -0.58
USF1-202ENST00000368020 RRHO14718 337 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 USF1P22415 310 aaPredicted RBP11.44□□□□□ -0.58
USF1-202ENST00000368020 GRNP28799 593 aaKnown RBP11.44□□□□□ -0.58
USF1-202ENST00000368020 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
USF1-202ENST00000368020 OR4C13Q8NGP0 309 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 OR9G1Q8NH87 305 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 NANPQ8TBE9 248 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 NAT8Q9UHE5 227 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 LSM4Q9Y4Z0 139 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms