RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NEU1Q99519 415 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 PLAUP00749 431 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 CCL5P13501 91 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 LGALS3P17931 250 aaKnown RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 GPR3P46089 330 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 OR10J3Q5JRS4 329 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 HES3Q5TGS1 186 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 AGBL5Q8NDL9 886 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 SF3B5Q9BWJ5 86 aaKnown RBP5.21□□□□□ -1.58
VPS13B-203ENST00000358544 FBLN5Q9UBX5 448 aa5.21□□□□□ -1.58
VPS13B-203ENST00000358544 CHD6Q8TD26 2715 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 RRHO14718 337 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TIMM23BQ5SRD1 257 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 COX14Q96I36 57 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 ZNF479Q96JC4 524 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 UNC79Q9P2D8 2635 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 PSG6Q00889 435 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 VSTM2AQ8TAG5 236 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 A0A1B0GW15 77 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 OR11H12B2RN74 326 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 DXOO77932 396 aaKnown RBP5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TEPPQ6URK8 271 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 OR11H1Q8NG94 326 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 OR11H2Q8NH07 326 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TNFSF14O43557 240 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 IFI6P09912 130 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TMEM249Q2WGJ8 235 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 LCN12Q6JVE5 192 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 WNT16Q9UBV4 365 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 LOC105371242A0A075B767 164 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 PPIAL4CA0A0B4J2A2 164 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 PPIAL4GP0DN37 164 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 KCNMB1Q16558 191 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 FHL5Q5TD97 284 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TTC9CQ8N5M4 171 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 NHP2Q9NX24 153 aaKnown RBP5.2□□□□□ -1.58
VPS13B-203ENST00000358544 LHFPL6Q9Y693 200 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 C9JQL5 133 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 NAPSAO96009 420 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 DOT1LQ8TEK3 1739 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 A0A0G2JLM5 398 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 DMRTA2Q96SC8 542 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 C2orf16Q68DN1 1984 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 KBTBD11-OT1A0A1B0GTJ5 212 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 IL6RP08887 468 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-203ENST00000358544 CD27P26842 260 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 OR1L1Q8NH94 360 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 FOXC2Q99958 501 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 C19orf24Q9BVV8 132 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TRAV8-2A0A0B4J237 113 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 SHISA7A6NL88 538 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 SCTP09683 121 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 RND2P52198 227 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 KRTCAP3Q53RY4 240 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 GAGE2BQ13066 116 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 GAGE2EQ4V326 116 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 C2orf83Q53S99 150 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 ANKRD33Q7Z3H0 272 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 NFAM1Q8NET5 270 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-203ENST00000358544 MAP1LC3AQ9H492 121 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 GAGE2DQ9UEU5 116 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 TYMSP04818 313 aa5.2□□□□□ -1.58
VPS13B-203ENST00000358544 KLRC4-KLRK1H3BQV0 150 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 M0R1B8 84 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 THY1P04216 161 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 MYF5P13349 255 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 DUSP23Q9BVJ7 150 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 TRAV8-6A0A0B4J262 113 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 SPINK8P0C7L1 97 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 CKS2P33552 79 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 PPP1CAP62136 330 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 OR9G4Q8NGQ1 327 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 MAP1AP78559 2803 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-203ENST00000358544 OR4D5Q8NGN0 318 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 AMMECR1Q9Y4X0 333 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-203ENST00000358544 CDKN1AP38936 164 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 HOXA4Q00056 320 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-203ENST00000358544 DEFB108BQ8NET1 73 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 MRPL32Q9BYC8 188 aaKnown RBP5.19□□□□□ -1.58
VPS13B-203ENST00000358544 GAGE12BA1L429 117 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 ASPHD2Q6ICH7 369 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 PLPPR1Q8TBJ4 325 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 IGHV3-13P01766 116 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 IGHV3-7P01780 117 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 ADIPOQQ15848 244 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 GAGE13Q4V321 117 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 TEX43Q6ZNM6 134 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 CXXC4Q9H2H0 198 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 CYSLTR1Q9Y271 337 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 MUC21A0A0G2JKD1 596 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 MUC21A0A140T8X8 626 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 PEX7O00628 323 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 IGFBP3P17936 291 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-203ENST00000358544 LGALS4P56470 323 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 KIR3DS1Q14943 382 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 MUC21Q5SSG8 566 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 TMEM238C9JI98 176 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 TSPAN2O60636 221 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 ZG16O60844 167 aa5.19□□□□□ -1.58
VPS13B-203ENST00000358544 IGHMP01871 453 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms