RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PEX7O00628 323 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 CDK2AP2O75956 126 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 PRTN3P24158 256 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 COL9A3Q14050 684 aaPredicted RBP5.34□□□□□ -1.56
VCAN-203ENST00000343200 SFTA2Q6UW10 78 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 CYP2G1PQ6ZSU1 146 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 TMEM86BQ8N661 226 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 CLDND2Q8NHS1 167 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 DEFB118Q96PH6 123 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 RPP21Q9H633 154 aaKnown RBP5.34□□□□□ -1.56
VCAN-203ENST00000343200 TRAV41A0A0B4J266 112 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 RAMP1O60894 148 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 IGKCP01834 107 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 EVI2AP22794 236 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 GLRX5Q86SX6 157 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 C1RLQ9NZP8 487 aa5.34□□□□□ -1.56
VCAN-203ENST00000343200 ANKRD34AQ69YU3 496 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 GAGE2AQ6NT46 116 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 KISS1RQ969F8 398 aaPredicted RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 TARM1B6A8C7 271 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 NPFFO15130 113 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 CIARTQ8N365 385 aaPredicted RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 VKORC1Q9BQB6 163 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 COL5A3P25940 1745 aaPredicted RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 A0A0A6YYD5 115 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 K7N7A8 449 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 CDC42EP2O14613 210 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 NDUFB3O43676 98 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 MALP21145 153 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 CDAP32320 146 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 TDGF1P3P51864 188 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 ACTL10Q5JWF8 245 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 ATP5L2Q7Z4Y8 100 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 TDHQ8IZJ6 230 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 ZADH2Q8N4Q0 377 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 LINC01549A6NIU2 74 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 PRSS23O95084 383 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 AGERQ15109 404 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 EBLN2Q6P2I7 272 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 RCC1LQ96I51 464 aaKnown RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 FIZ1Q96SL8 496 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 SPATA25Q9BR10 227 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 SIRT5Q9NXA8 310 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 SEMA5BQ9P283 1151 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 MUC21A0A0G2JKD1 596 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 MUC21A0A140T8X8 626 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 MUC21Q5SSG8 566 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 CHAC1Q9BUX1 264 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 CX3CL1P78423 397 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 OR8B12Q8NGG6 310 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 OR51G1Q8NGK1 321 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 K7EQS6 105 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 TNFSF14O43557 240 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 IGHG4P01861 327 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 PPBPP02775 128 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 HOXD9P28356 352 aaPredicted RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 LAMTOR1Q6IAA8 161 aa5.33□□□□□ -1.56
VCAN-203ENST00000343200 SRSF12Q8WXF0 261 aaKnown RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
VCAN-203ENST00000343200 A0A1W2PS18 150 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 IRF3Q14653 427 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 FAM74A4Q5TZK3 123 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 FER1L6-AS1Q8NA97 138 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 AQP3Q92482 292 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 NPCDR1Q9BY65 106 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 V9GYY9 64 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 KCNE1BA0A087WTH5 132 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 FFAR1O14842 300 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 DDNO94850 711 aaPredicted RBP5.32□□□□□ -1.56
VCAN-203ENST00000343200 AMBPP02760 352 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 C2orf68Q2NKX9 166 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 TMEFF1Q8IYR6 380 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 C5orf66Q9H5L9 145 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 PROCRQ9UNN8 238 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 IGHV3-64DA0A0J9YX35 117 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 KLF4O43474 513 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 MOSP00540 346 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 FBXL15Q9H469 300 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 PCOLCE2Q9UKZ9 415 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 CR1P17927 2039 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 DSCR4P56555 118 aaPredicted RBP5.32□□□□□ -1.56
VCAN-203ENST00000343200 TMEM25Q86YD3 366 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 TP53INP2Q8IXH6 220 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 NAPSAO96009 420 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 LAGE3Q14657 143 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 PSG3Q16557 428 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 FSCN3Q9NQT6 498 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 ALG1L2C9J202 215 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 DLL1O00548 723 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 TMPRSS2O15393 492 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 CXorf67Q86X51 503 aaPredicted RBP5.32□□□□□ -1.56
VCAN-203ENST00000343200 MRM2Q9UI43 246 aaKnown RBP5.32□□□□□ -1.56
VCAN-203ENST00000343200 FNDC10F2Z333 226 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 LEPROTO15243 131 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms