RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HES7Q9BYE0 225 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 ZNF324BQ6AW86 544 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-201ENST00000337331 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-201ENST00000337331 THYN1Q9P016 225 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A10PA6NDY2 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A8PA6NJQ4 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A7PA6NKC0 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A22PA8MWA6 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A23PA8MXZ1 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 K7ESF4 209 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 M0R296 226 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 CXorf1O96002 111 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 IGHMP01871 453 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 RPL31P62899 125 aaKnown RBP13.63□□□□□ -0.23
NPHP3-201ENST00000337331 OR1L1Q8NH94 360 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 PCNX1Q96RV3 2341 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 IGKV3D-11A0A0A0MRZ8 115 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 OR2T8A6NH00 312 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 C18orf12Q96KH6 178 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 ZNF319Q9P2F9 582 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 KIAA2026Q5HYC2 2103 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 TRAV9-2A0A087WT02 112 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 MGST3O14880 152 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 IGLC2P0DOY2 106 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 IGLC3P0DOY3 106 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 ZNF818PQ6ZRF7 136 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 OR1L8Q8NGR8 309 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 NPVFQ9HCQ7 196 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
NPHP3-201ENST00000337331 COX6A1P12074 109 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 COL8A1P27658 744 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 CEBPDP49716 269 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-201ENST00000337331 SIGMAR1Q99720 223 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 GTF3C1Q12789 2109 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 DOCK7Q96N67 2140 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 IGHV2OR16-5A0A0B4J2B6 119 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 LEPROTL1O95214 131 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 CD3EP07766 207 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 C3orf79P0CE67 100 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 TNFRSF14Q92956 283 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 INSIG2Q9Y5U4 225 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 MTCL1Q9Y4B5 1905 aaKnown RBP13.62□□□□□ -0.23
NPHP3-201ENST00000337331 ZNF324O75467 553 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-201ENST00000337331 MPV17P39210 176 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 KCNS1Q96KK3 526 aa13.62□□□□□ -0.23
NPHP3-201ENST00000337331 IGHV1-69-2A0A0G2JMI3 117 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 CEACAM3P40198 252 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 ASPHD2Q6ICH7 369 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 OR1N2Q8NGR9 330 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 RAB1CQ92928 201 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 CHRNA10Q9GZZ6 450 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 FBXL7Q9UJT9 491 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 MED13LQ71F56 2210 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 NUPR1O60356 82 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 FHL1Q13642 323 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 LRRC75BQ2VPJ9 315 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 C10orf128Q5T292 105 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 SIP14410 1827 aa13.61□□□□□ -0.23
NPHP3-201ENST00000337331 C7orf71A4D174 169 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 IL18BPO95998 194 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 OR10W1Q8NGF6 305 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 MBD3L1Q8WWY6 194 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 TMEM70Q9BUB7 260 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 ZNF703Q9H7S9 590 aaPredicted RBP13.6□□□□□ -0.23
NPHP3-201ENST00000337331 FAM87AP0C7U9 286 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 LINC00869P0C866 280 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 NHLRC2Q8NBF2 726 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 IL15RAQ13261 267 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 COA6Q5JTJ3 125 aaKnown RBP13.6□□□□□ -0.23
NPHP3-201ENST00000337331 PNKDQ8N490 385 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 RLFQ13129 1914 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 TRAV1-1A0A0B4J248 108 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 P01737 135 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 ZNF137PP52743 207 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 PQLC2Q6ZP29 291 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 DOLPP1Q86YN1 238 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 SHISA5Q8N114 240 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 CCL13Q99616 98 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 MS4A5Q9H3V2 200 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 HILPDAQ9Y5L2 63 aa13.6□□□□□ -0.23
NPHP3-201ENST00000337331 IGHV3-21A0A0B4J1V1 117 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 NKX2-8O15522 239 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 GPX1P07203 203 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 CA7P43166 264 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 C10orf113Q5VZT2 155 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms