RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DOCK10Q96BY6 2186 aa11.46□□□□□ -0.57
SYNE3-201ENST00000334258 FOLR3P41439 243 aa11.46□□□□□ -0.57
SYNE3-201ENST00000334258 MMD2Q8IY49 270 aa11.46□□□□□ -0.57
SYNE3-201ENST00000334258 STPG4Q8N801 248 aa11.46□□□□□ -0.57
SYNE3-201ENST00000334258 RTL8AQ9BWD3 113 aa11.46□□□□□ -0.57
SYNE3-201ENST00000334258 CLDN14O95500 239 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 CXorf1O96002 111 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 OR5G3P0C626 314 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 NTF3P20783 257 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 GABRA2P47869 451 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 TCL1AP56279 114 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 RPL19P84098 196 aaKnown RBP11.46□□□□□ -0.58
SYNE3-201ENST00000334258 GTF3C1Q12789 2109 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 RPEL1Q2QD12 228 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 PKIBQ9C010 78 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 GNB4Q9HAV0 340 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 SPTA1P02549 2419 aa11.46□□□□□ -0.58
SYNE3-201ENST00000334258 ZNF253O75346 499 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 PPBPP02775 128 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 ARR3P36575 388 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 AESQ08117 197 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 APH1AQ96BI3 265 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 WNT10AQ9GZT5 417 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 C15orf62A8K5M9 175 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 ATP1A1-AS1Q5TC04 95 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 ATOH7Q8N100 152 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 OR2Y1Q8NGV0 311 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 POLDIP2Q9Y2S7 368 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 ZZEF1O43149 2961 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 A0A1W2PNU3 283 aaPredicted RBP11.45□□□□□ -0.58
SYNE3-201ENST00000334258 C12orf77C9JDV5 145 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 RAB29O14966 203 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 GPX1P07203 203 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 CXorf67Q86X51 503 aaPredicted RBP11.45□□□□□ -0.58
SYNE3-201ENST00000334258 ZBTB34Q8NCN2 500 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 UQCR10Q9UDW1 63 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 IL19Q9UHD0 177 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 RNF114Q9Y508 228 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
SYNE3-201ENST00000334258 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
SYNE3-201ENST00000334258 APC2O95996 2303 aa11.45□□□□□ -0.58
SYNE3-201ENST00000334258 TMEM30CPA0ZSE6 113 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 CDX4O14627 284 aaPredicted RBP11.44□□□□□ -0.58
SYNE3-201ENST00000334258 MT-CO3P00414 261 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 HBZP02008 142 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 PRAMEF5Q5TYX0 476 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 PRAMEF6Q5VXH4 476 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 TPRX1Q8N7U7 411 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 GMPPAQ96IJ6 420 aaPredicted RBP11.44□□□□□ -0.58
SYNE3-201ENST00000334258 PSG11Q9UQ72 335 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 C22orf46C9J442 243 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 NTN3O00634 580 aaPredicted RBP11.44□□□□□ -0.58
SYNE3-201ENST00000334258 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 C1orf174Q8IYL3 243 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 ST6GALNAC3Q8NDV1 305 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 CORO2AQ92828 525 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 LAMTOR2Q9Y2Q5 125 aa11.44□□□□□ -0.58
SYNE3-201ENST00000334258 PINLYPA6NC86 204 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 K7EN84 100 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 RRHO14718 337 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 CYB561P49447 251 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 HINT1P49773 126 aaPredicted RBP11.43□□□□□ -0.58
SYNE3-201ENST00000334258 UBE2V1Q13404 147 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 VWC2Q2TAL6 325 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 SPINK14Q6IE38 97 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 OR4A16Q8NH70 328 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 RAB1CQ92928 201 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 TAAR6Q96RI8 345 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 C12orf49Q9H741 205 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 SERTAD4Q9NUC0 356 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 MBNL3Q9NUK0 354 aaKnown RBP11.43□□□□□ -0.58
SYNE3-201ENST00000334258 PSPNO60542 156 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 HAND1O96004 215 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 DUSP3P51452 185 aaPredicted RBP11.43□□□□□ -0.58
SYNE3-201ENST00000334258 FAM19A2Q8N3H0 131 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 MS4A5Q9H3V2 200 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 ANKRD11Q6UB99 2663 aaPredicted RBP11.43□□□□□ -0.58
SYNE3-201ENST00000334258 ACTL6BO94805 426 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 COL8A2P25067 703 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 COMPP49747 757 aaPredicted RBP11.43□□□□□ -0.58
SYNE3-201ENST00000334258 LGALS4P56470 323 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 PSG7Q13046 419 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 IL11RAQ14626 422 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 FXYD3Q14802 87 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 DCAF12Q5T6F0 453 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 Q8IYB0 196 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 TMEM45BQ96B21 275 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 GCM1Q9NP62 436 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 ADGRG4Q8IZF6 3080 aa11.43□□□□□ -0.58
SYNE3-201ENST00000334258 FAM166BA8MTA8 275 aa11.42□□□□□ -0.58
SYNE3-201ENST00000334258 FCGR3BO75015 233 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms