RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SHISA9B4DS77 424 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 PPIAL4DF5H284 164 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 GFRA3O60609 400 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 IFNA1P01562 189 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 PPIAL4FP0DN26 164 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 CD1BP29016 333 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 DLK1P80370 383 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 CA5BP1Q8WTZ4 195 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 ZCCHC14Q8WYQ9 949 aaKnown RBP14.27□□□□□ -0.12
DDX28-201ENST00000332395 CCL17Q92583 94 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 RNASE6Q93091 150 aaKnown RBP14.27□□□□□ -0.12
DDX28-201ENST00000332395 VAX2Q9UIW0 290 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 PPIAL4AQ9Y536 164 aa14.27□□□□□ -0.12
DDX28-201ENST00000332395 YLPM1P49750 1951 aaKnown RBP14.27□□□□□ -0.12
DDX28-201ENST00000332395 ROS1P08922 2347 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 ELOA3CA0A087WX78 387 aaPredicted RBP14.27□□□□□ -0.13
DDX28-201ENST00000332395 C17orf112F2Z3M2 114 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 RRHO14718 337 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 TMPRSS3P57727 454 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 ERVFRD-1P60508 538 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 RPL31P62899 125 aaKnown RBP14.27□□□□□ -0.13
DDX28-201ENST00000332395 MEF2CQ06413 473 aaPredicted RBP14.27□□□□□ -0.13
DDX28-201ENST00000332395 PMS2P11Q13670 270 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 SLC35E3Q7Z769 313 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 DMRTC2Q8IXT2 367 aaPredicted RBP14.27□□□□□ -0.13
DDX28-201ENST00000332395 HIST3H2BBQ8N257 126 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 OR13D1Q8NGV5 346 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 P2RX4Q99571 388 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 GAL3ST2Q9H3Q3 398 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 WDR83OSQ9Y284 106 aa14.27□□□□□ -0.13
DDX28-201ENST00000332395 TRGV8A0A0C4DH27 118 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 HMGB3O15347 200 aaKnown RBP14.26□□□□□ -0.13
DDX28-201ENST00000332395 TMEM106BQ9NUM4 274 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 ZNRD1Q9P1U0 126 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 TLN1Q9Y490 2541 aaKnown RBP14.26□□□□□ -0.13
DDX28-201ENST00000332395 TGIF2-C20orf24A0A0A6YYL0 155 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 E7EQL1 145 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 FCN3O75636 299 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 SOD3P08294 240 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 CD81P60033 236 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 ABHD12Q8N2K0 398 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 Q8N7P7 452 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 NEUROG1Q92886 237 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 ACTR3CQ9C0K3 210 aaPredicted RBP14.26□□□□□ -0.13
DDX28-201ENST00000332395 TMEM14BQ9NUH8 114 aa14.26□□□□□ -0.13
DDX28-201ENST00000332395 FOXA2Q9Y261 457 aaPredicted RBP14.26□□□□□ -0.13
DDX28-201ENST00000332395 PRSS46E5RG02 174 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 PPP1R2P9O14990 202 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 CT45A6P0DMU7 189 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 CT45A5P0DMU8 189 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 CT45A7P0DMV0 189 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 POU2AF1Q16633 256 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 REC114Q7Z4M0 266 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 OR10A7Q8NGE5 316 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 TMEM170AQ8WVE7 144 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 DYNLRB1Q9NP97 96 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 KALRNO60229 2985 aa14.25□□□□□ -0.13
DDX28-201ENST00000332395 SMCO3A2RU48 225 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 HRASP01112 189 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 CCL3L1P16619 93 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 ZNF714Q96N38 554 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 GPR61Q9BZJ8 451 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 URGCP-MRPS24S4R325 110 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 CYB5BO43169 146 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 TRGC2P03986 189 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 HSPE1P61604 102 aaKnown RBP14.24□□□□□ -0.13
DDX28-201ENST00000332395 GFI1BQ5VTD9 330 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 RAB24Q969Q5 203 aa14.24□□□□□ -0.13
DDX28-201ENST00000332395 A0A1B0GV90 55 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 MEF2BQ02080 365 aaPredicted RBP14.23□□□□□ -0.13
DDX28-201ENST00000332395 RTL8BQ17RB0 113 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 SLC35D1Q9NTN3 355 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 TNFRSF13BO14836 293 aaPredicted RBP14.23□□□□□ -0.13
DDX28-201ENST00000332395 MPDU1O75352 247 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 IGKV1-16P04430 117 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 RNF224P0DH78 156 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 DEFA4P12838 97 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 PKIAP61925 76 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 GAMTQ14353 236 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 ACOT6Q3I5F7 207 aaPredicted RBP14.23□□□□□ -0.13
DDX28-201ENST00000332395 LYPD2Q6UXB3 125 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 TREML4Q6UXN2 200 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 H1FXQ92522 213 aaKnown RBP14.23□□□□□ -0.13
DDX28-201ENST00000332395 MS4A5Q9H3V2 200 aa14.23□□□□□ -0.13
DDX28-201ENST00000332395 NDUFB3O43676 98 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 LRRC10Q5BKY1 277 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 ZNF833PQ6ZTB9 187 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 RAXQ9Y2V3 346 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 PKDREJQ9NTG1 2253 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.22□□□□□ -0.13
DDX28-201ENST00000332395 TRGC1P0CF51 173 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 CDC34P49427 236 aaPredicted RBP14.22□□□□□ -0.13
DDX28-201ENST00000332395 PSMB3P49720 205 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 UCNP55089 124 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 PNRC1Q12796 327 aaPredicted RBP14.22□□□□□ -0.13
DDX28-201ENST00000332395 PDZD11Q5EBL8 140 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 SLC24A4Q8NFF2 622 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 ABHD5Q8WTS1 349 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 ENY2Q9NPA8 101 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms