RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 THBS3P49746 956 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BDP58876 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 B2MP61769 119 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BCP62807 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST2H2BEQ16778 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.48□□□□□ -0.89
PTPN2-201ENST00000309660 OR13D1Q8NGV5 346 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 NEUROG1Q92886 237 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 MGST2Q99735 147 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 RAB9BQ9NP90 201 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 OR51B2Q9Y5P1 312 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 PLXNB1O43157 2135 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 hADV38S2A0JD32 116 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 CXorf65A6NEN9 183 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 C15orf61A6NNL5 157 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 FAM87AP0C7U9 286 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 S100A2P29034 98 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 VDAC2P45880 294 aaPredicted RBP9.48□□□□□ -0.89
PTPN2-201ENST00000309660 ZNF788Q6ZQV5 615 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 CENPVQ7Z7K6 275 aaPredicted RBP9.48□□□□□ -0.89
PTPN2-201ENST00000309660 ABHD5Q8WTS1 349 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 TMEM170AQ8WVE7 144 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 FRZBQ92765 325 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 MANBALQ9NQG1 85 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 C17orf100A8MU93 164 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 J3QR06 171 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 TRGC1P0CF51 173 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 GATA4P43694 442 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 HSPE1P61604 102 aaKnown RBP9.48□□□□□ -0.89
PTPN2-201ENST00000309660 CYP2G1PQ6ZSU1 146 aa9.48□□□□□ -0.89
PTPN2-201ENST00000309660 ZCCHC14Q8WYQ9 949 aaKnown RBP9.48□□□□□ -0.89
PTPN2-201ENST00000309660 SPTBN1Q01082 2364 aaKnown RBP9.48□□□□□ -0.89
PTPN2-201ENST00000309660 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.89
PTPN2-201ENST00000309660 HRASP01112 189 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 CGB3P0DN86 165 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 CGB7P0DN87 165 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 GATA2P23769 480 aaPredicted RBP9.47□□□□□ -0.89
PTPN2-201ENST00000309660 S100PP25815 95 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 GALR1P47211 349 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 GGTLC1Q9BX51 225 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 GPR61Q9BZJ8 451 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 PLEKHA3Q9HB20 300 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 KIR2DS2P43631 304 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 PAX5Q02548 391 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 RTL8BQ17RB0 113 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 DDB2Q92466 427 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 MED13LQ71F56 2210 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 SRRM4A7MD48 611 aaKnown RBP9.47□□□□□ -0.89
PTPN2-201ENST00000309660 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 DLX1P56177 255 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 MLANAQ16655 118 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 CR1LQ2VPA4 569 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
PTPN2-201ENST00000309660 SPATA31B1PQ5VZV4 182 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 ASCL5Q7RTU5 278 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 OR10X1Q8NGY0 326 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 SCNM1Q9BWG6 230 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 NPVFQ9HCQ7 196 aa9.47□□□□□ -0.89
PTPN2-201ENST00000309660 TRGV8A0A0C4DH27 118 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 ZNF729A6NN14 1252 aaPredicted RBP9.46□□□□□ -0.89
PTPN2-201ENST00000309660 TMEM250H0YL14 139 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 SMIM6P0DI80 62 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 IGFBP2P18065 325 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 CHRNB4P30926 498 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 VWC2Q2TAL6 325 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 TEPPQ6URK8 271 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 LYPD2Q6UXB3 125 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 Q8N7P7 452 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 OR10W1Q8NGF6 305 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 OR10D4PQ8NGN7 298 aa9.46□□□□□ -0.89
PTPN2-201ENST00000309660 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.89
PTPN2-201ENST00000309660 SEPSECSQ9HD40 501 aaKnown RBP9.46□□□□□ -0.89
PTPN2-201ENST00000309660 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.89
PTPN2-201ENST00000309660 ANKHD1Q8IWZ3 2542 aaKnown RBP9.46□□□□□ -0.89
PTPN2-201ENST00000309660 PPIAL4EA0A075B759 164 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 PPIAL4DF5H284 164 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 CT45A6P0DMU7 189 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 CT45A5P0DMU8 189 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 CT45A7P0DMV0 189 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 PPIAL4FP0DN26 164 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 NPPCP23582 126 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 FAM3BP58499 235 aaPredicted RBP9.46□□□□□ -0.9
PTPN2-201ENST00000309660 C1QL4Q86Z23 238 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 STPG3Q8N7X2 389 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 Q8NA96 180 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 FAM216AQ8WUB2 273 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 HARBI1Q96MB7 349 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 PCGF1Q9BSM1 259 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 PPIAL4AQ9Y536 164 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 THBDP07204 575 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 IL6RP08887 468 aaPredicted RBP9.46□□□□□ -0.9
PTPN2-201ENST00000309660 RAB31Q13636 194 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 OR4P4Q8NGL7 312 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 FAM222BQ8WU58 562 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms