RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 RNASE7Q9H1E1 156 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 ESPL1Q14674 2120 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 TUSC2O75896 110 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 COX6A1P12074 109 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 UQCRFS1P47985 274 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 IL11RAQ14626 422 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 ALKBH4Q9NXW9 302 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 HSBP1O75506 76 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 CGAP01215 116 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 CX3CL1P78423 397 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 OR8B8Q15620 311 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 COMMD5Q9GZQ3 224 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 DEPPQ9NTK1 212 aa13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-201ENST00000273062 CCL3P10147 92 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 RPL31P62899 125 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 NINJ1Q92982 152 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 ZNF835Q9Y2P0 537 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 BDP1A6H8Y1 2624 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 SERTM2A0A1B0GWG4 89 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 ARL14EPLP0DKL9 152 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 CD1BP29016 333 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 Q8N7P7 452 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 SCCPDHQ8NBX0 429 aa13.1□□□□□ -0.31
CTDSP1-201ENST00000273062 H3BUT2 72 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 RNASEKQ6P5S7 137 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 SLC25A47Q6Q0C1 308 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 DOLPP1Q86YN1 238 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 ZNF48Q96MX3 618 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 CER1O95813 267 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 SLC25A6P12236 298 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 ZNF16P17020 682 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 GUCA1AP43080 201 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 EDDM3BP56851 147 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 RBM11P57052 281 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 SLC25A53Q5H9E4 307 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 TMEM105Q8N8V8 129 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 IMMP1LQ96LU5 166 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 NPFFR1Q9GZQ6 430 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 IL36RNQ9UBH0 155 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 LOC102723996A0A087X1L8 192 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 IGHV3-15A0A0B4J1V0 119 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 TEX48A0A1B0GUV7 120 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 OR2Z1Q8NG97 314 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 OR2T6Q8NHC8 308 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 BORCS8Q96FH0 119 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 OR2D2Q9H210 308 aa13.09□□□□□ -0.31
CTDSP1-201ENST00000273062 MT-ND6P03923 174 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 PLP1P60201 277 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 CKS1BP61024 79 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 SPINK9Q5DT21 86 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 FADS6Q8N9I5 356 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 PERPQ96FX8 193 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 EAF1Q96JC9 268 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 SIGMAR1Q99720 223 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 ULBP2Q9BZM5 246 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 PROK2Q9HC23 129 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 CLCF1Q9UBD9 225 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 PMS2P5A8MQ11 134 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 APCSP02743 223 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 RPL8P62917 257 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 TMEM45BQ96B21 275 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 STRADBQ9C0K7 418 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 SCRT2Q9NQ03 307 aa13.08□□□□□ -0.32
CTDSP1-201ENST00000273062 NPIPB13A6NJU9 1138 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 NPIPB4C9JG80 1138 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 K7EP34 96 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 M0R135 149 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 RPL24P83731 157 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 ZNF585BQ52M93 769 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 GTF2H5Q6ZYL4 71 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 TNFRSF19Q9NS68 423 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 MGST1P10620 155 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 CCDC144NLQ6NUI1 221 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 PCSK4Q6UW60 755 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 FAM222BQ8WU58 562 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 ZDHHC16Q969W1 377 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 TMEM70Q9BUB7 260 aa13.07□□□□□ -0.32
CTDSP1-201ENST00000273062 A0A0G2JMM0 328 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 A0A1W2PPB8 328 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms