RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 LINC01560Q8TB33 94 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 P2RX4Q99571 388 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 ACTR3CQ9C0K3 210 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 RAB9BQ9NP90 201 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 TGIF2-C20orf24A0A0A6YYL0 155 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 MAS1LP35410 378 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 PDLIM3Q53GG5 364 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 FAM209BQ5JX69 171 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 TREML4Q6UXN2 200 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 CORO2AQ92828 525 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 RNASE6Q93091 150 aaKnown RBP15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 MS4A5Q9H3V2 200 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 LINC00574Q9H8X3 128 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 NKX6-3A6NJ46 265 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 C17orf112F2Z3M2 114 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 OPN1MWP04001 364 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 CT45A6P0DMU7 189 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 CT45A5P0DMU8 189 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 CT45A7P0DMV0 189 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 OPN1MW2P0DN77 364 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 OPN1MW3P0DN78 364 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 FBXL19-AS1Q494R0 122 aa15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 WDR25Q64LD2 544 aaPredicted RBP15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 RBMS3Q6XE24 437 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 SLC25A48Q6ZT89 311 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 UTP20O75691 2785 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 YLPM1P49750 1951 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-201ENST00000253754 hADV38S2A0JD32 116 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 C5orf52A6NGY3 159 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 IFNA4P05014 189 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 S100A6P06703 90 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 RPS10P46783 165 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 MEOX2P50222 304 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 RPL31P62899 125 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 RPUSD4Q96CM3 377 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 MALSU1Q96EH3 234 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 SSX3Q99909 188 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 HINT2Q9BX68 163 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 SDF2L1Q9HCN8 221 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 ABCA4P78363 2273 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 SRRM4A7MD48 611 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 COL8A2P25067 703 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 RPP30P78346 268 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 LYPD2Q6UXB3 125 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 MGST2Q99735 147 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 PATZ1Q9HBE1 687 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 TMEM14BQ9NUH8 114 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 LINC00312Q9Y6C7 94 aa15.29■□□□□ 0.04
PDLIM4-201ENST00000253754 TMEM178BH3BS89 294 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 CDC34P49427 236 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 PSMB3P49720 205 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 FOXA2Q9Y261 457 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 PAGE4O60829 102 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 YIF1AO95070 293 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 ACOT6Q3I5F7 207 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 DMRTC2Q8IXT2 367 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 OR4F5Q8NH21 305 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 C1orf159Q96HA4 380 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 OR4F4Q96R69 305 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 DIRC2Q96SL1 478 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 SMIM7Q9BQ49 75 aa15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 KMT2BQ9UMN6 2715 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-201ENST00000253754 PPIAL4EA0A075B759 164 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 SHISA9B4DS77 424 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 PPIAL4DF5H284 164 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 PPIAL4FP0DN26 164 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 PMS2P11Q13670 270 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 MIC13Q5XKP0 118 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 OR13D1Q8NGV5 346 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 PPIAL4AQ9Y536 164 aa15.27■□□□□ 0.04
PDLIM4-201ENST00000253754 E7EQL1 145 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 CYB5BO43169 146 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 UQCRFS1P47985 274 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 HSPE1P61604 102 aaKnown RBP15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 ARSJQ5FYB0 599 aaPredicted RBP15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 NCMAPQ5T1S8 102 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 TMEM200BQ69YZ2 307 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 H1FXQ92522 213 aaKnown RBP15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 ADTRPQ96IZ2 230 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 SIRT7Q9NRC8 400 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 SLC35D1Q9NTN3 355 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 OR51B2Q9Y5P1 312 aa15.27■□□□□ 0.03
PDLIM4-201ENST00000253754 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 CA2P00918 260 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 REG1BP48304 166 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 FABP9Q0Z7S8 132 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 PNRC1Q12796 327 aaPredicted RBP15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 SLC24A4Q8NFF2 622 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 SSMEM1Q8WWF3 244 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 MRPL20Q9BYC9 149 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 TMEM106BQ9NUM4 274 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 LRBAP50851 2863 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 SPTAN1Q13813 2472 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 NPY1RP25929 384 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 ADIRFQ15847 76 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 GGTLC1Q9BX51 225 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 CTSZQ9UBR2 303 aa15.26■□□□□ 0.03
PDLIM4-201ENST00000253754 B4DEV8 164 aa15.25■□□□□ 0.03
PDLIM4-201ENST00000253754 LY86O95711 162 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms