RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF320A2RRD8 509 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 A8MXE2 369 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 IFNL4K9M1U5 179 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 M0R1B8 84 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 ATP5G3P48201 142 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 FABP6P51161 128 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 UBE2G2P60604 165 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 BTF3L4Q96K17 158 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 AURKAIP1Q9NWT8 199 aaPredicted RBP14.08□□□□□ -0.16
FOXA1-201ENST00000250448 TRAPPC1Q9Y5R8 145 aa14.08□□□□□ -0.16
FOXA1-201ENST00000250448 TRGV8A0A0C4DH27 118 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 HBZP02008 142 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 PSG7Q13046 419 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 Q8N7P7 452 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 CLUHP3Q96NS8 147 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 J3QW42 95 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 KLF14Q8TD94 323 aaPredicted RBP14.07□□□□□ -0.16
FOXA1-201ENST00000250448 NINJ1Q92982 152 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 KCNIP2Q9NS61 270 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 FKBP11Q9NYL4 201 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 ZNF835Q9Y2P0 537 aa14.07□□□□□ -0.16
FOXA1-201ENST00000250448 IGHV2OR16-5A0A0B4J2B6 119 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 OOEPA6NGQ2 149 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 C15orf62A8K5M9 175 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 SOX15O60248 233 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 GRPP07492 148 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 CST9LP1Q5W188 147 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 TEX38Q6PEX7 206 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 VHLLQ6RSH7 139 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 TCTEX1D1Q8N7M0 179 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 IMMP2LQ96T52 175 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 DERL1Q9BUN8 251 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 WDR83OSQ9Y284 106 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 TRAV38-1A0A0B4J264 116 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 F6UZH7 168 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 NDUFB4O95168 129 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
FOXA1-201ENST00000250448 GCSAMLQ5JQS6 135 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 PXMP4Q9Y6I8 212 aa14.06□□□□□ -0.16
FOXA1-201ENST00000250448 SCGB1D1O95968 90 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM249Q2WGJ8 235 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 SLC35E4Q6ICL7 350 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 HSBP1L1C9JCN9 74 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 IGLV1-44P01699 117 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 HNF1AP20823 631 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 KLRB1Q12918 225 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 ZNF114Q8NC26 417 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 RAB1CQ92928 201 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 HES4Q9HCC6 221 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 RNF24Q9Y225 148 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 A0A1B0GUS0 222 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 AESQ08117 197 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM256Q8N2U0 113 aa14.05□□□□□ -0.16
FOXA1-201ENST00000250448 ZNF25P17030 456 aaPredicted RBP14.04□□□□□ -0.16
FOXA1-201ENST00000250448 FOXL1Q12952 345 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MSMPQ1L6U9 139 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MRGPRDQ8TDS7 321 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 POLR3KQ9Y2Y1 108 aaPredicted RBP14.04□□□□□ -0.16
FOXA1-201ENST00000250448 KIR2DL5BA0A0G2JN68 375 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 KIR2DL5BA0A0G2JPC4 375 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MDFIC2A0A1B0GVS7 189 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 LINC00473A8K010 186 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 CD1BP29016 333 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 EDDM3BP56851 147 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 KIR2DL5AQ8N109 375 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 COQ2Q96H96 371 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 QTRT1Q9BXR0 403 aaKnown RBP14.04□□□□□ -0.16
FOXA1-201ENST00000250448 SNHG12Q9BXW3 62 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 MSL2Q9HCI7 577 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 ELOVL5Q9NYP7 299 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 NAGKQ9UJ70 344 aa14.04□□□□□ -0.16
FOXA1-201ENST00000250448 A0A1W2PPV4 95 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 TMEM210A6NLX4 147 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 WNT9BO14905 357 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 ERVFC1-1P60608 527 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 C1orf194Q5T5A4 169 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 LRP11Q86VZ4 500 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 SGMS2Q8NHU3 365 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 SFRP2Q96HF1 295 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 GOLT1BQ9Y3E0 138 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 GCH1P30793 250 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 RBPJQ06330 500 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 RPH3ALQ9UNE2 315 aa14.03□□□□□ -0.16
FOXA1-201ENST00000250448 IQCF6A8MYZ5 107 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 RBFOX2O43251 390 aaKnown RBP eCLIP14.02□□□□□ -0.161e-6■■■■□ 23
FOXA1-201ENST00000250448 GABRA2P47869 451 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 LINC00205P59089 165 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 DUSP13Q9UII6 198 aa14.02□□□□□ -0.16
FOXA1-201ENST00000250448 IGHV3-43A0A0B4J1X8 118 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 IGHV3-43DP0DP04 118 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 R3HDM4Q96D70 268 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 MS4A10Q96PG2 267 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 HSD17B10Q99714 261 aaKnown RBP14.02□□□□□ -0.17
FOXA1-201ENST00000250448 OBP2BQ9NPH6 170 aa14.02□□□□□ -0.17
FOXA1-201ENST00000250448 NUPR1O60356 82 aa14.01□□□□□ -0.17
FOXA1-201ENST00000250448 NPSP0C0P6 89 aa14.01□□□□□ -0.17
FOXA1-201ENST00000250448 OR9G9P0C7N8 305 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms