RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 SELENOVP59797 346 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 CD81P60033 236 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 RPL23AP62750 156 aaKnown RBP8.27□□□□□ -1.09
USP11-201ENST00000218348 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 BTNL8Q6UX41 500 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 HEPN1Q6WQI6 88 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 MOB1BQ7L9L4 216 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 CCL17Q92583 94 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 HINT2Q9BX68 163 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 VSIRQ9H7M9 311 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 HES4Q9HCC6 221 aa8.27□□□□□ -1.09
USP11-201ENST00000218348 LIN7CQ9NUP9 197 aaKnown RBP8.27□□□□□ -1.09
USP11-201ENST00000218348 HCFC1P51610 2035 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 TMPRSS2O15393 492 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 SPINT2O43291 252 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 CLDN14O95500 239 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 GAPDHP04406 335 aaKnown RBP8.26□□□□□ -1.09
USP11-201ENST00000218348 CXCL1P09341 107 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 CEACAM3P40198 252 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 BSPH1Q075Z2 132 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 PRAMEF5Q5TYX0 476 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 PINX1Q96BK5 328 aaKnown RBP8.26□□□□□ -1.09
USP11-201ENST00000218348 ZFYVE26Q68DK2 2539 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 ARHGAP32A7KAX9 2087 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 TRBV6-6A0A0A6YYG2 114 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 UBE2L5PA0A1B0GUS4 154 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 FAM90A27PA6NNH2 459 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 GLRXP35754 106 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 GPR12P47775 334 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 DLX1P56177 255 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 MBNL2Q5VZF2 373 aaKnown RBP8.26□□□□□ -1.09
USP11-201ENST00000218348 FRZBQ92765 325 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 RNF115Q9Y4L5 304 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 DYSFO75923 2080 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 TGIF2-C20orf24A0A0A6YYL0 155 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 CLEC18AA5D8T8 446 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 DPRXA6NFQ7 191 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 C16orf97H3BN30 126 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 ZG16O60844 167 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 IGHV1-46P01743 117 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 DANCRP0C864 163 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 ZNF134P52741 427 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 TPTE2P1Q5T6R2 138 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 SLC35E4Q6ICL7 350 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 FAM90A1Q86YD7 464 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 CLEC18CQ8NCF0 446 aa8.26□□□□□ -1.09
USP11-201ENST00000218348 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 CEBPZOSA8MTT3 80 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 COL8A2P25067 703 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 BRWD1-AS2P59051 145 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 SRSF7Q16629 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP11-201ENST00000218348 ZNF645Q8N7E2 425 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 SAT2Q96F10 170 aaPredicted RBP8.25□□□□□ -1.09
USP11-201ENST00000218348 ZNF48Q96MX3 618 aaPredicted RBP8.25□□□□□ -1.09
USP11-201ENST00000218348 CITED1Q99966 193 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 GINS3Q9BRX5 216 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 GCM1Q9NP62 436 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 SRRM5B3KS81 715 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 ZNF737O75373 536 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 MMP23AO75900 390 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 AMBPP02760 352 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 CRYBA4P53673 196 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 ZNF266Q14584 549 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 COL5A1-AS1Q5SY13 56 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 LINC01560Q8TB33 94 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 RBKSQ9H477 322 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 HIVEP3Q5T1R4 2406 aa8.25□□□□□ -1.09
USP11-201ENST00000218348 ZFP92A6NM28 416 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 LYNX1G3V0Z9 82 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 DFFBO76075 338 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 IFNA5P01569 189 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 LYNX1P0DP58 116 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 MYOD1P15172 320 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 GRNP28799 593 aaKnown RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 TIMP3P35625 211 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 H2BFWTQ7Z2G1 175 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 ZNF843Q8N446 348 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 ABHD5Q8WTS1 349 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 RND1Q92730 232 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 MALSU1Q96EH3 234 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 MEGF9Q9H1U4 602 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 PARP11Q9NR21 331 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 HRNRQ86YZ3 2850 aaPredicted RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 A0A1B0GU03 582 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 ZNF705FA8MVS1 300 aaPredicted RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 PROP1O75360 226 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 SEC11BP0C7V7 166 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 ZNF705DP0CH99 300 aaPredicted RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 ZNF705BP0CI00 300 aaPredicted RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 LMO1P25800 156 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 RPS23P62266 143 aaKnown RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 MMDQ15546 238 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 IL34Q6ZMJ4 242 aa8.24□□□□□ -1.09
USP11-201ENST00000218348 C1orf229Q6ZS94 237 aaPredicted RBP8.24□□□□□ -1.09
USP11-201ENST00000218348 HAPLN4Q86UW8 402 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms