RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 COLCA1Q6ZS62 124 aa13.96□□□□□ -0.17
CTDP1-201ENST00000075430 GNB4Q9HAV0 340 aa13.96□□□□□ -0.17
CTDP1-201ENST00000075430 TMEM30CPA0ZSE6 113 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 OR5B21A6NL26 309 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
CTDP1-201ENST00000075430 UNQ5815/PRO19632Q6UWF5 114 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 Q6ZR03 302 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 ZNF645Q8N7E2 425 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 LINC00479Q96M42 142 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 MCRIP2Q9BUT9 160 aaKnown RBP13.95□□□□□ -0.18
CTDP1-201ENST00000075430 ZNF586Q9NXT0 402 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 ACACAQ13085 2346 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 COL4A2P08572 1712 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 A8MXE2 369 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 NTN3O00634 580 aaPredicted RBP13.95□□□□□ -0.18
CTDP1-201ENST00000075430 TOX4O94842 621 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 PLAUP00749 431 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 WNT2P09544 360 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 CD24P25063 80 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 MPV17P39210 176 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 TP53TG3Q9ULZ0 132 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 SMG1Q96Q15 3661 aaKnown RBP13.95□□□□□ -0.18
CTDP1-201ENST00000075430 C15orf62A8K5M9 175 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 TIMM8AO60220 97 aaPredicted RBP13.95□□□□□ -0.18
CTDP1-201ENST00000075430 BRS3P32247 399 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 BRWD1-AS2P59051 145 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 MPC1Q9Y5U8 109 aa13.95□□□□□ -0.18
CTDP1-201ENST00000075430 ARR3P36575 388 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 PSG7Q13046 419 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 UTF1Q5T230 341 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 AGMATQ9BSE5 352 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 COA6Q5JTJ3 125 aaKnown RBP13.94□□□□□ -0.18
CTDP1-201ENST00000075430 TMEM251Q8N6I4 163 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 MIEN1Q9BRT3 115 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 K7EN84 100 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 PDE6DO43924 150 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 TREML4Q6UXN2 200 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 MIR17HGQ75NE6 70 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 FAM173AQ9BQD7 235 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 POLDIP2Q9Y2S7 368 aa13.94□□□□□ -0.18
CTDP1-201ENST00000075430 APELAP0DMC3 54 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 ERVK-16P61578 105 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 TBC1D28Q2M2D7 210 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 STPG4Q8N801 248 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 SSBP4Q9BWG4 385 aaPredicted RBP13.93□□□□□ -0.18
CTDP1-201ENST00000075430 TTTY12Q9BZ98 90 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 TMEM210A6NLX4 147 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 LHX2P50458 406 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 CCL11P51671 97 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 PMCHL1Q16048 86 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 ZNRF1Q8ND25 227 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 AHRRA9YTQ3 701 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 IGFBP2P18065 325 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 GNG4P50150 75 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 MEOX1P50221 254 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 NRN1Q9NPD7 142 aa13.93□□□□□ -0.18
CTDP1-201ENST00000075430 LNP1A1A4G5 178 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 H3BTX0 84 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 OR5G3P0C626 314 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 FOXF2Q12947 444 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 ATP6V1FQ16864 119 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 DCAF10Q5QP82 559 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 Q6ZS49 121 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 MGST2Q99735 147 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 ENY2Q9NPA8 101 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 ZNRD1Q9P1U0 126 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 A0A1B0GWJ7 208 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 C9orf172C9J069 976 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 GFRA1P56159 465 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 LCN2P80188 198 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 RPEL1Q2QD12 228 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 CENPWQ5EE01 88 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 ZNF439Q8NDP4 499 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 TECRQ9NZ01 308 aaKnown RBP13.92□□□□□ -0.18
CTDP1-201ENST00000075430 TACC2O95359 2948 aa13.92□□□□□ -0.18
CTDP1-201ENST00000075430 SPTAN1Q13813 2472 aaKnown RBP13.92□□□□□ -0.18
CTDP1-201ENST00000075430 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.91□□□□□ -0.18
CTDP1-201ENST00000075430 M0QZ24 198 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 VENTXO95231 258 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 RELBQ01201 579 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 TNRC18O15417 2968 aaPredicted RBP13.91□□□□□ -0.18
CTDP1-201ENST00000075430 CLDN18P56856 261 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 DCAF16Q9NXF7 216 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 CBY1Q9Y3M2 126 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 HELTA6NFD8 242 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 PMS2P5A8MQ11 134 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 TNFSF13O75888 250 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 PDLIM4P50479 330 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 LINC00310P59036 64 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 RNASEKQ6P5S7 137 aaKnown RBP13.91□□□□□ -0.18
CTDP1-201ENST00000075430 STPG3Q8N7X2 389 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 BORCS7Q96B45 105 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 COQ2Q96H96 371 aa13.91□□□□□ -0.18
CTDP1-201ENST00000075430 C20orf202A1L168 122 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 BTF3P20290 206 aaKnown RBP13.9□□□□□ -0.18
CTDP1-201ENST00000075430 GCHFRP30047 84 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 RND1Q92730 232 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms