RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 Q5BKY6 102 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 OR4B1Q8NGF8 309 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 IGKV3D-15A0A087WSY6 115 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 SCN2AQ99250 2005 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 DMRT1Q9Y5R6 373 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 DIRC3C9JPN6 131 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 K7ERU9 68 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 GCHFRP30047 84 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 IFITM10A6NMD0 228 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 SIAH2O43255 324 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 LINC00271P0C7V0 271 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 TRGC1P0CF51 173 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 FAM53AQ6NSI3 398 aaPredicted RBP19.54■□□□□ 0.72
TARBP1-201ENST00000040877 HIST1H2BAQ96A08 127 aa19.54■□□□□ 0.72
TARBP1-201ENST00000040877 TRGV3P03979 118 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 CRYBB3P26998 211 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 OR4A47Q6IF82 309 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 ZNF841Q6ZN19 808 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 CACNG8Q8WXS5 425 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 SDHCQ99643 169 aaPredicted RBP19.53■□□□□ 0.72
TARBP1-201ENST00000040877 DLX6P56179 175 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 AMY1AP04745 511 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 CBLN4Q9NTU7 201 aa19.53■□□□□ 0.72
TARBP1-201ENST00000040877 GPX1P07203 203 aa19.52■□□□□ 0.72
TARBP1-201ENST00000040877 ZIC4Q8N9L1 334 aa19.52■□□□□ 0.72
TARBP1-201ENST00000040877 DUX5Q96PT3 197 aa19.52■□□□□ 0.72
TARBP1-201ENST00000040877 CNOT1A5YKK6 2376 aaKnown RBP19.52■□□□□ 0.72
TARBP1-201ENST00000040877 LCN2P80188 198 aa19.52■□□□□ 0.72
TARBP1-201ENST00000040877 SH3BGRL3Q9H299 93 aa19.52■□□□□ 0.72
TARBP1-201ENST00000040877 CELA3BP08861 270 aa19.52■□□□□ 0.71
TARBP1-201ENST00000040877 AGAP20933 346 aa19.52■□□□□ 0.71
TARBP1-201ENST00000040877 CLDND2Q8NHS1 167 aa19.52■□□□□ 0.71
TARBP1-201ENST00000040877 SEMA5BQ9P283 1151 aa19.52■□□□□ 0.71
TARBP1-201ENST00000040877 C5orf52A6NGY3 159 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 SPACA3Q8IXA5 215 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 RNASEH2CQ8TDP1 164 aaKnown RBP19.51■□□□□ 0.71
TARBP1-201ENST00000040877 MAP1LC3AQ9H492 121 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 RAXQ9Y2V3 346 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 ALPK2Q86TB3 2170 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 CHD5Q8TDI0 1954 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 TRBV6-7A0A0A0MS04 114 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 TRBV9A0A0B4J1U6 114 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 YPEL1O60688 119 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 MOSP00540 346 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 IL6RP08887 468 aaPredicted RBP19.51■□□□□ 0.71
TARBP1-201ENST00000040877 KLK2P20151 261 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 AMMECR1LQ6DCA0 310 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 YPEL2Q96QA6 119 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 FBXL15Q9H469 300 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 CEP250Q9BV73 2442 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 CDX1P47902 265 aaPredicted RBP19.51■□□□□ 0.71
TARBP1-201ENST00000040877 TCF24Q7RTU0 167 aa19.51■□□□□ 0.71
TARBP1-201ENST00000040877 COL25A1Q9BXS0 654 aaPredicted RBP19.51■□□□□ 0.71
TARBP1-201ENST00000040877 LOC389332A0A1B0GUA5 103 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 VENTXO95231 258 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 IL18BPO95998 194 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 C19orf54Q5BKX5 351 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 SRSF12Q8WXF0 261 aaKnown RBP19.5■□□□□ 0.71
TARBP1-201ENST00000040877 ATG101Q9BSB4 218 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 C17orf98A8MV24 154 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 H0YL77 283 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 M0R3E3 92 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 STAG3L2P0CL84 134 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 NPCDR1Q9BY65 106 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 GPR61Q9BZJ8 451 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 CGB1A6NKQ9 187 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 TIMP3P35625 211 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 FAM201AQ5SY85 155 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 LINC00305Q7Z4B0 112 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 IGKV1D-33P01593 117 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 IGKV1-33P01594 117 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 GREB1Q4ZG55 1949 aa19.5■□□□□ 0.71
TARBP1-201ENST00000040877 PARLQ9H300 379 aa19.49■□□□□ 0.71
TARBP1-201ENST00000040877 UBE2L6O14933 153 aa19.49■□□□□ 0.71
TARBP1-201ENST00000040877 GPX4P36969 197 aaPredicted RBP19.49■□□□□ 0.71
TARBP1-201ENST00000040877 PEAR1Q5VY43 1037 aaPredicted RBP19.49■□□□□ 0.71
TARBP1-201ENST00000040877 RTBDNQ9BSG5 229 aaPredicted RBP19.49■□□□□ 0.71
TARBP1-201ENST00000040877 HAX1O00165 279 aa19.49■□□□□ 0.71
TARBP1-201ENST00000040877 C21orf62Q9NYP8 219 aa19.49■□□□□ 0.71
TARBP1-201ENST00000040877 ZNF506Q5JVG8 444 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 PPP1R27Q86WC6 154 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 OR1P1Q8NH06 330 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 ARPC1AQ92747 370 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 MIEN1Q9BRT3 115 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 FBXL7Q9UJT9 491 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 IGHV3OR16-10A0A075B7F0 116 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 A0A1B0GV90 55 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 PF4P02776 101 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 OR1N2Q8NGR9 330 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 PGLYRP4Q96LB8 373 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 BTF3P20290 206 aaKnown RBP19.48■□□□□ 0.71
TARBP1-201ENST00000040877 GOLT1AQ6ZVE7 132 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 SPRR3Q9UBC9 169 aa19.48■□□□□ 0.71
TARBP1-201ENST00000040877 ZNF646O15015 1829 aaPredicted RBP19.47■□□□□ 0.71
TARBP1-201ENST00000040877 SAMD13Q5VXD3 122 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 HSPB9Q9BQS6 159 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.47■□□□□ 0.71
TARBP1-201ENST00000040877 MRPL20Q9BYC9 149 aaKnown RBP19.47■□□□□ 0.71
TARBP1-201ENST00000040877 RTN4RQ9BZR6 473 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 C7orf69Q9H7B7 122 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms