RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 MIEN1Q9BRT3 115 aa1.42□□□□□ -2.18
GYPB-216ENST00000638448 C20orf27Q9GZN8 174 aa1.42□□□□□ -2.18
GYPB-216ENST00000638448 TUBA4BQ9H853 241 aa1.42□□□□□ -2.18
GYPB-216ENST00000638448 FBXO5Q9UKT4 447 aa1.42□□□□□ -2.18
GYPB-216ENST00000638448 CCL26Q9Y258 94 aa1.42□□□□□ -2.18
GYPB-216ENST00000638448 A0A087WUJ7 227 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 A0A0J9YX75 114 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 SMIM9A6NGZ8 99 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 KNCNA6PVL3 124 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 PLA2G10O15496 165 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 GNRH2O43555 120 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 SRP19P09132 144 aaKnown RBP1.41□□□□□ -2.18
GYPB-216ENST00000638448 HSD11B1P28845 292 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 ALDH3A1P30838 453 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 C2orf91Q6ZV80 131 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 DYNAPQ8N1N2 210 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 OR4X1Q8NH49 305 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 ZNF675Q8TD23 568 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 DCSTAMPQ9H295 470 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 GLTPQ9NZD2 209 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 NUP155O75694 1391 aa1.41□□□□□ -2.18
GYPB-216ENST00000638448 ZFYVE9O95405 1425 aa1.4□□□□□ -2.18
GYPB-216ENST00000638448 DICER1Q9UPY3 1922 aaKnown RBP1.4□□□□□ -2.18
GYPB-216ENST00000638448 OTOFQ9HC10 1997 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 GRIN2BQ13224 1484 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 TRGV5A0A0B4J1U4 118 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 A0A0J9YW62 118 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 C2orf74A8MZ97 194 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 LY6LH3BQJ8 138 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 OR2B3O76000 313 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 CAPZBP47756 277 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 EMP1P54849 157 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 AP1S1P61966 158 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 SNRPD2P62316 118 aaKnown RBP1.4□□□□□ -2.19
GYPB-216ENST00000638448 TMED2Q15363 201 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 PABPC1L2AQ5JQF8 200 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 MSRB3Q8IXL7 192 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 OR6V1Q8N148 313 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 DNAJC30Q96LL9 226 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 TRIM4Q9C037 500 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 CXorf21Q9HAI6 301 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 PRTFDC1Q9NRG1 225 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 MINOS1-NBL1R4GNA1 71 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 ATAD5Q96QE3 1844 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 CACNA1DQ01668 2161 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 SDK2Q58EX2 2172 aa1.4□□□□□ -2.19
GYPB-216ENST00000638448 NOS1APO75052 506 aaPredicted RBP1.39□□□□□ -2.19
GYPB-216ENST00000638448 NSA2O95478 260 aaKnown RBP1.39□□□□□ -2.19
GYPB-216ENST00000638448 HLA-DRB1P01911 266 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 CCL5P13501 91 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 PSMB8P28062 276 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 CCL20P78556 96 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 MEF2BQ02080 365 aaPredicted RBP1.39□□□□□ -2.19
GYPB-216ENST00000638448 GUK1Q16774 197 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 LPCAT3Q6P1A2 487 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 LYZL1Q6UWQ5 148 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 SSX8Q7RTT4 187 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 LHFPL1Q86WI0 220 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 TBC1D19Q8N5T2 526 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 ZNF283Q8N7M2 679 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 OR51D1Q8NGF3 324 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 TSPAN32Q96QS1 320 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 NIPSNAP1Q9BPW8 284 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 COMMD5Q9GZQ3 224 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 CXCL16Q9H2A7 254 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 NDUFB11Q9NX14 153 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 MMACHCQ9Y4U1 282 aa1.39□□□□□ -2.19
GYPB-216ENST00000638448 ZSWIM8A7E2V4 1837 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 CHD2O14647 1828 aaKnown RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 MTUS2Q5JR59 1369 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 TRBV20OR9-2A0A075B6H5 130 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 IGHV3-64A0A075B6Q5 118 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 OR4C46A6NHA9 309 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 C11orf86A6NJI1 115 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 CST2P09228 141 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 CBR1P16152 277 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 GZMHP20718 246 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 CA5AP35218 305 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 CSN1S1P47710 185 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 RAB13P51153 203 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 HIST1H4AP62805 103 aaKnown RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 RPL30P62888 115 aaKnown RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 ZNF90Q03938 601 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 CDK10Q15131 360 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 GRK1Q15835 563 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 IBA57Q5T440 356 aaKnown RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 C9orf64Q5T6V5 341 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 TMEM42Q69YG0 159 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 BRD3OSQ6XYD6 125 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 Q6ZS49 121 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 OOSP2Q86WS3 158 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 ZNF676Q8N7Q3 588 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 OR5C1Q8NGR4 320 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 OR13C4Q8NGS5 318 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 OR5J2Q8NH18 312 aa1.38□□□□□ -2.19
GYPB-216ENST00000638448 MRPL30Q8TCC3 161 aaKnown RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 ZCCHC13Q8WW36 166 aaKnown RBP1.38□□□□□ -2.19
GYPB-216ENST00000638448 MRPS24Q96EL2 167 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms