RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ACSF3Q4G176 576 aaPredicted RBP11.68□□□□□ -0.54
CNOT3-210ENST00000618939 FAM201AQ5SY85 155 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 PROK2Q9HC23 129 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 NBASA2RRP1 2371 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 FAM157AC9JC47 383 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 RAMP3O60896 148 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 IL18BPO95998 194 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 CD59P13987 128 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 GNB2P62879 340 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 WDR82Q6UXN9 313 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 OR8B3Q8NGG8 313 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 OR8B2Q96RD0 313 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
CNOT3-210ENST00000618939 VENTXO95231 258 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 RPL27AP46776 148 aaKnown RBP11.68□□□□□ -0.54
CNOT3-210ENST00000618939 SLC35B1P78383 322 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 RNF24Q9Y225 148 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 IGHV3-21A0A0B4J1V1 117 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 DLL1O00548 723 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 SELENOTP62341 195 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 ZNF146Q15072 292 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 FAM209BQ5JX69 171 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 THYN1Q9P016 225 aa11.68□□□□□ -0.54
CNOT3-210ENST00000618939 C2orf16Q68DN1 1984 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 TFF1P04155 84 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
CNOT3-210ENST00000618939 MC5RP33032 325 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 CD55P08174 381 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 PCSK4Q6UW60 755 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 FA2HQ7L5A8 372 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 DMRTA2Q96SC8 542 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 RASL11BQ9BPW5 248 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 M0R143 59 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 LILRA1O75019 489 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 CA2P00918 260 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 P01737 135 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 HIST1H1EP10412 219 aaKnown RBP11.67□□□□□ -0.54
CNOT3-210ENST00000618939 HTR1DP28221 377 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 GCHFRP30047 84 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 RSPO1Q2MKA7 263 aaPredicted RBP11.67□□□□□ -0.54
CNOT3-210ENST00000618939 MST1LQ2TV78 715 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 OR8I2Q8N0Y5 310 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 HEATR1Q9H583 2144 aaKnown RBP11.67□□□□□ -0.54
CNOT3-210ENST00000618939 CLEC3BP05452 202 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 G0S2P27469 103 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 RTP5Q14D33 572 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 LRP11Q86VZ4 500 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 TMEM171Q8WVE6 324 aa11.67□□□□□ -0.54
CNOT3-210ENST00000618939 COL8A1P27658 744 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 MFAP2P55001 183 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 Q6ZS49 121 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 SLC25A17O43808 307 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 PLAUP00749 431 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 CRYBB3P26998 211 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 DMRT1Q9Y5R6 373 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 TRAV34A0A0B4J273 112 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 MT-ND6P03923 174 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 IL6RP08887 468 aaPredicted RBP11.66□□□□□ -0.54
CNOT3-210ENST00000618939 FAM27E3Q08E93 113 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 MMDQ15546 238 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 TBX15Q96SF7 602 aa11.66□□□□□ -0.54
CNOT3-210ENST00000618939 ZNF430Q9H8G1 570 aaPredicted RBP11.66□□□□□ -0.54
CNOT3-210ENST00000618939 GNG7O60262 68 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 HYPMO75409 117 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 GCGP01275 180 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 RND2P52198 227 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 IBA57Q5T440 356 aaKnown RBP11.65□□□□□ -0.54
CNOT3-210ENST00000618939 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 HOXA5P20719 270 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 SFRP2Q96HF1 295 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 VSIRQ9H7M9 311 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 TRBV23-1A0A0A0MS06 115 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 M0R2Z0 102 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 PSPNO60542 156 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 APCSP02743 223 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
CNOT3-210ENST00000618939 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 MBD3L1Q8WWY6 194 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 ZMAT5Q9UDW3 170 aaKnown RBP11.65□□□□□ -0.54
CNOT3-210ENST00000618939 ALPK3Q96L96 1907 aa11.65□□□□□ -0.54
CNOT3-210ENST00000618939 OR4A47Q6IF82 309 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 COLCA1Q6ZS62 124 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 FAM90A1Q86YD7 464 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 MMD2Q8IY49 270 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 VN1R17PQ8TDU5 208 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 DNAJC4Q9NNZ3 241 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 HSPB7Q9UBY9 170 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms