RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SHOXO15266 292 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 TXNL1O43396 289 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 EIF4EBP3O60516 100 aaPredicted RBP7.22□□□□□ -1.25
CCDC47-207ENST00000612558 ATP6V1G1O75348 118 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 FOXH1O75593 365 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 LY86O95711 162 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 IAPPP10997 89 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 COX7A1P24310 79 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 RAB13P51153 203 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 DLX1P56177 255 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 LCN2P80188 198 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 PAX2Q02962 417 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 TMEM177Q53S58 311 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 RPL7L1Q6DKI1 246 aaKnown RBP7.22□□□□□ -1.25
CCDC47-207ENST00000612558 OR4A47Q6IF82 309 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 CLEC9AQ6UXN8 241 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 ZNF429Q86V71 674 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 STX12Q86Y82 276 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 SLC7A5P1Q8MH63 180 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 PNKDQ8N490 385 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 UBAC2Q8NBM4 344 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 OR11H6Q8NGC7 330 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 OR4P4Q8NGL7 312 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 OR4C13Q8NGP0 309 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 C10orf105Q8TEF2 133 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 FLYWCH2Q96CP2 140 aaKnown RBP7.22□□□□□ -1.25
CCDC47-207ENST00000612558 CIB3Q96Q77 187 aaPredicted RBP7.22□□□□□ -1.25
CCDC47-207ENST00000612558 QTRT1Q9BXR0 403 aaKnown RBP7.22□□□□□ -1.25
CCDC47-207ENST00000612558 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 WASHC3Q9Y3C0 194 aa7.22□□□□□ -1.25
CCDC47-207ENST00000612558 IGHV2-70DA0A0C4DH43 119 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 RPS10-NUDT3A0A1W2PQS6 291 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 SRRM4A7MD48 611 aaKnown RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 VWC2LB2RUY7 222 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 LY6LH3BQJ8 138 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 J3QKU1 62 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 IFNA17P01571 189 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 ARG1P05089 322 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 IL6RP08887 468 aaPredicted RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 PLA2G2AP14555 144 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 HTR1DP28221 377 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 SULT1A1P50225 295 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 DSCR9P59020 149 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 SPCS3P61009 180 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 PRB3Q04118 309 aaPredicted RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 PDLIM3Q53GG5 364 aaPredicted RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 EIF5AL1Q6IS14 154 aaKnown RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 DTD1Q8TEA8 209 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 BSCL2Q96G97 398 aaPredicted RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 HARBI1Q96MB7 349 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 SLC25A32Q9H2D1 315 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 WFDC1Q9HC57 220 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 SIRT7Q9NRC8 400 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 BET1LQ9NYM9 111 aa7.21□□□□□ -1.25
CCDC47-207ENST00000612558 POLR3KQ9Y2Y1 108 aaPredicted RBP7.21□□□□□ -1.25
CCDC47-207ENST00000612558 PTPN13Q12923 2485 aa7.21□□□□□ -1.26
CCDC47-207ENST00000612558 TRAV3A0A0B4J244 114 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 CEBPZOSA8MTT3 80 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 LEUTXA8MZ59 168 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 H3BP45 60 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 UPK2O00526 184 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 CST7O76096 145 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 CEACAM3P40198 252 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 LGALS7P47929 136 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 DYNLT3P51808 116 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 OR2B8PP59922 312 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 RPS16P62249 146 aaKnown RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 ZNF266Q14584 549 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 SPANXN5Q5MJ07 72 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 VMO1Q7Z5L0 202 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 OR1S2Q8NGQ3 325 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 OR5C1Q8NGR4 320 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 NRGNQ92686 78 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 RPEQ96AT9 228 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 PERPQ96FX8 193 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 ARV1Q9H2C2 271 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 MMP26Q9NRE1 261 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TMEM14BQ9NUH8 114 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 FKBP11Q9NYL4 201 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 DPM3Q9P2X0 92 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 NUP50Q9UKX7 468 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 PRNDQ9UKY0 176 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 FOXA2Q9Y261 457 aaPredicted RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 INSIG2Q9Y5U4 225 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TET2Q6N021 2002 aaPredicted RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 IGHV1-3A0A0C4DH29 117 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 LINC00862A6NCI5 91 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 ODF3BA8MYP8 253 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 DFFBO76075 338 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 SAA1P0DJI8 122 aaPredicted RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 HSPE1P61604 102 aaKnown RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 HBG1P69891 147 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 HBG2P69892 147 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TPTE2P1Q5T6R2 138 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 HCP5Q6MZN7 132 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 MOB3BQ86TA1 216 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms