RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LYRM2Q9NU23 88 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 DPM3Q9P2X0 92 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 TOX4O94842 621 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 CEACAM3P40198 252 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 HOXA1P49639 335 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 TAS2R30P59541 319 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 UBE2KP61086 200 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 OR4A47Q6IF82 309 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 UQCC3Q6UW78 93 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 SMIM8Q96KF7 97 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 WSB1Q9Y6I7 421 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 CHD6Q8TD26 2715 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 IGHV1-3A0A0C4DH29 117 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 FAM24AA6NFZ4 105 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 FAM74A7A6NL05 159 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 TMEM50AO95807 157 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 CAV2P51636 162 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 RELBQ01201 579 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 DEFA5Q01523 94 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 KLRD1Q13241 179 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 FAM74A3Q4VXF1 159 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 TPTE2P1Q5T6R2 138 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 LRRC75A-AS1Q8N1F1 130 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 PHYHIPLQ96FC7 376 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 ZNF471Q9BX82 626 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 RBKSQ9H477 322 aa14.29□□□□□ -0.12
SHKBP1-224ENST00000600718 SRRM4A7MD48 611 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-224ENST00000600718 IL6RP08887 468 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-224ENST00000600718 HOXB4P17483 251 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-224ENST00000600718 DEFB113Q30KQ7 82 aa14.28□□□□□ -0.12
SHKBP1-224ENST00000600718 OR52E5Q8NH55 327 aa14.28□□□□□ -0.12
SHKBP1-224ENST00000600718 QTRT1Q9BXR0 403 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-224ENST00000600718 PCP4L1A6NKN8 68 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 RNASEK-C17orf49H0YIS7 233 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 USF1P22415 310 aaPredicted RBP14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 RPS16P62249 146 aaKnown RBP14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 MOB3BQ86TA1 216 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 ZNF429Q86V71 674 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 TMEM252Q8N6L7 170 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 BPIFCQ8NFQ6 507 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 HARBI1Q96MB7 349 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 SAV1Q9H4B6 383 aaPredicted RBP14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 CYTL1Q9NRR1 136 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 PSENENQ9NZ42 101 aa14.27□□□□□ -0.12
SHKBP1-224ENST00000600718 TRAV3A0A0B4J244 114 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 ZNF98A6NK75 572 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 SPCS3P61009 180 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 EWSR1Q01844 656 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 PAX8Q06710 450 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 MINOS1Q5TGZ0 78 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 TBX15Q96SF7 602 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 LPAR2Q9HBW0 351 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 BET1LQ9NYM9 111 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 MINOS1-NBL1R4GNA1 71 aa14.27□□□□□ -0.13
SHKBP1-224ENST00000600718 IGSF23A1L1A6 192 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 UPK2O00526 184 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 LY86O95711 162 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 IAPPP10997 89 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 LGALS7P47929 136 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 OR2B8PP59922 312 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 NHLH2Q02577 135 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 PDLIM3Q53GG5 364 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 PUSL1Q8N0Z8 303 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 CIB3Q96Q77 187 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 PRNDQ9UKY0 176 aa14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 FOXA2Q9Y261 457 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-224ENST00000600718 RAB19A4D1S5 217 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 C15orf61A6NNL5 157 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 IFNA17P01571 189 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 UBE2E1P51965 193 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 LGALS4P56470 323 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 S100A12P80511 92 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 BAXQ07812 192 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 LDLRAD2Q5SZI1 272 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 STOML3Q8TAV4 291 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 FBXL17Q9UF56 701 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 AKAP6Q13023 2319 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 CEBPZOSA8MTT3 80 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 OOSP1A8MZH6 123 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 EIF5AP63241 154 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 OR4A5Q8NH83 315 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 VSTM2AQ8TAG5 236 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 DTD1Q8TEA8 209 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 MBD6Q96DN6 1003 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 RBMXL1Q96E39 390 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 TMEM14BQ9NUH8 114 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 FKBP11Q9NYL4 201 aa14.25□□□□□ -0.13
SHKBP1-224ENST00000600718 IGHV3-72A0A0B4J1Y9 119 aa14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 A0A1W2PPI3 338 aa14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 TPT1P13693 172 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 CLEC9AQ6UXN8 241 aa14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 BSCL2Q96G97 398 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 TBL2Q9Y4P3 447 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 ARHGAP32A7KAX9 2087 aa14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 LRRK2Q5S007 2527 aa14.24□□□□□ -0.13
SHKBP1-224ENST00000600718 A0A1W2PRD5 423 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 A0A1W2PRF3 423 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 A0A1W2PRM7 423 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 JTBO76095 146 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms