RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 HPRT1P00492 218 aa21.89■■□□□ 1.09
SSBP4-206ENST00000599699 CD3DP04234 171 aa21.89■■□□□ 1.09
SSBP4-206ENST00000599699 S100GP29377 79 aa21.89■■□□□ 1.09
SSBP4-206ENST00000599699 ASPHD1Q5U4P2 390 aa21.89■■□□□ 1.09
SSBP4-206ENST00000599699 PUSL1Q8N0Z8 303 aaKnown RBP21.89■■□□□ 1.09
SSBP4-206ENST00000599699 TINAGL1Q9GZM7 467 aaPredicted RBP21.89■■□□□ 1.09
SSBP4-206ENST00000599699 COA4Q9NYJ1 87 aa21.89■■□□□ 1.09
SSBP4-206ENST00000599699 IGHV3-11P01762 117 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 MRPS10P82664 201 aaKnown RBP21.88■■□□□ 1.09
SSBP4-206ENST00000599699 RUNX1Q01196 453 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 PHLDA2Q53GA4 152 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 C10orf55Q5SWW7 151 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 TMEM167AQ8TBQ9 72 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 DPF1Q92782 380 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 SPIN2AQ99865 258 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 SPIN2BQ9BPZ2 258 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 MCRIP2Q9BUT9 160 aaKnown RBP21.88■■□□□ 1.09
SSBP4-206ENST00000599699 ALX4Q9H161 411 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-206ENST00000599699 HRASLSQ9HDD0 168 aa21.88■■□□□ 1.09
SSBP4-206ENST00000599699 H3BUA1 57 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 WIPF1O43516 503 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 NQO2P16083 231 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 TBPP20226 339 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 TAS2R31P59538 309 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 GPR61Q9BZJ8 451 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 RABL2AQ9UBK7 228 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-206ENST00000599699 RABL2BQ9UNT1 228 aa21.87■■□□□ 1.09
SSBP4-206ENST00000599699 S1PR2O95136 353 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 PRB2P02812 416 aaPredicted RBP21.86■■□□□ 1.09
SSBP4-206ENST00000599699 LGALS1P09382 135 aaKnown RBP21.86■■□□□ 1.09
SSBP4-206ENST00000599699 TAS2R19P59542 299 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 ZNF616Q08AN1 781 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 FOXB2Q5VYV0 432 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 OR4A47Q6IF82 309 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 TMEM229BQ8NBD8 167 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 DMBX1Q8NFW5 382 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 PLEKHA2Q9HB19 425 aa21.86■■□□□ 1.09
SSBP4-206ENST00000599699 RSL24D1Q9UHA3 163 aaKnown RBP21.86■■□□□ 1.09
SSBP4-206ENST00000599699 C13orf42A0A1B0GVH6 325 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 OR8U8P0C7N1 319 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 PGAM2P15259 253 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 F2RP25116 425 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 MAS1LP35410 378 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 FHL3Q13643 280 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 PDLIM3Q53GG5 364 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-206ENST00000599699 SLC38A6Q8IZM9 456 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 DGCR14Q96DF8 476 aaKnown RBP21.85■■□□□ 1.09
SSBP4-206ENST00000599699 FYTTD1Q96QD9 318 aaKnown RBP21.85■■□□□ 1.09
SSBP4-206ENST00000599699 RSRP1Q9BUV0 290 aa21.85■■□□□ 1.09
SSBP4-206ENST00000599699 RAB3DO95716 219 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 OR9G9P0C7N8 305 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 RPA2P15927 270 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 RPL27AP46776 148 aaKnown RBP21.84■■□□□ 1.09
SSBP4-206ENST00000599699 UCP3P55916 312 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 ERVK-16P61578 105 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 RPL8P62917 257 aaKnown RBP21.84■■□□□ 1.09
SSBP4-206ENST00000599699 SSBP1Q04837 148 aaKnown RBP21.84■■□□□ 1.09
SSBP4-206ENST00000599699 ARRDC1Q8N5I2 433 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 OR4A5Q8NH83 315 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 SMIM4Q8WVI0 70 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 BET1LQ9NYM9 111 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 COMMD9Q9P000 198 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 TNCP24821 2201 aa21.84■■□□□ 1.09
SSBP4-206ENST00000599699 A0A0G2JLM5 398 aa21.83■■□□□ 1.09
SSBP4-206ENST00000599699 TNFSF8P32971 234 aa21.83■■□□□ 1.09
SSBP4-206ENST00000599699 LPAR6P43657 344 aa21.83■■□□□ 1.09
SSBP4-206ENST00000599699 STEAP1BQ6NZ63 245 aa21.83■■□□□ 1.09
SSBP4-206ENST00000599699 OR4D10Q8NGI6 311 aa21.83■■□□□ 1.09
SSBP4-206ENST00000599699 NXF2Q9GZY0 626 aaKnown RBP21.83■■□□□ 1.09
SSBP4-206ENST00000599699 HLA-GP17693 338 aa21.82■■□□□ 1.08
SSBP4-206ENST00000599699 TBC1D26Q86UD7 250 aa21.82■■□□□ 1.08
SSBP4-206ENST00000599699 ADAD2Q8NCV1 583 aaKnown RBP21.82■■□□□ 1.08
SSBP4-206ENST00000599699 RBM38Q9H0Z9 239 aaKnown RBP21.82■■□□□ 1.08
SSBP4-206ENST00000599699 TMEM140Q9NV12 185 aa21.82■■□□□ 1.08
SSBP4-206ENST00000599699 DPPA5A6NC42 116 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 FABP12A6NFH5 140 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 HMX3A6NHT5 357 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 LINC01619G3V211 115 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 CTDSPLO15194 276 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 CD74P04233 296 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 HOXD3P31249 432 aaPredicted RBP21.81■■□□□ 1.08
SSBP4-206ENST00000599699 DEFA5Q01523 94 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 POU2AF1Q16633 256 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 SCGB2B2Q4G0G5 96 aa21.81■■□□□ 1.08
SSBP4-206ENST00000599699 IGHV4OR15-8A0A075B7B6 117 aa21.8■■□□□ 1.08
SSBP4-206ENST00000599699 A0A087WW49 117 aa21.8■■□□□ 1.08
SSBP4-206ENST00000599699 PPP5CP53041 499 aa21.8■■□□□ 1.08
SSBP4-206ENST00000599699 SLC25A42Q86VD7 318 aa21.8■■□□□ 1.08
SSBP4-206ENST00000599699 MARCH11A6NNE9 402 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 TEX22C9J3V5 150 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 UPK2O00526 184 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 BRI3O95415 125 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 KRASP01116 189 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 PRH1P02810 166 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 IL6RP08887 468 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-206ENST00000599699 MYOD1P15172 320 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 MEF2DQ14814 521 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 REC114Q7Z4M0 266 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 LHFPL1Q86WI0 220 aa21.79■■□□□ 1.08
SSBP4-206ENST00000599699 TTC9CQ8N5M4 171 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms