RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 FKBP11Q9NYL4 201 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 ZNF257Q9Y2Q1 563 aa23.61■■□□□ 1.37
CTDNEP1-208ENST00000573600 MFSD2BA6NFX1 497 aa23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 FGF2P09038 288 aa23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 SAA1P0DJI8 122 aaPredicted RBP23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 BLOC1S1P78537 153 aa23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 ARL16Q0P5N6 197 aa23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 ATP6V1FQ16864 119 aa23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 ZFYVE26Q68DK2 2539 aa23.6■■□□□ 1.37
CTDNEP1-208ENST00000573600 ATP6V0CP27449 155 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 RAB5CP51148 216 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 RPS16P62249 146 aaKnown RBP23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 AANATQ16613 207 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 HSD17B13Q7Z5P4 300 aaPredicted RBP23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 CLDND2Q8NHS1 167 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 VSTM2AQ8TAG5 236 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 KPTNQ9Y664 436 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 ARG1P05089 322 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 ZFP36P26651 326 aaKnown RBP23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 VDAC2P45880 294 aaPredicted RBP23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 SLC38A11Q08AI6 406 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 OR4A5Q8NH83 315 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 MS4A7Q9GZW8 240 aaPredicted RBP23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 HEYLQ9NQ87 328 aaPredicted RBP23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 PLA2G2EQ9NZK7 142 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 OR51B2Q9Y5P1 312 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 INSIG2Q9Y5U4 225 aa23.59■■□□□ 1.37
CTDNEP1-208ENST00000573600 KBTBD11O94819 623 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 LMO4P61968 165 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 SP5Q6BEB4 398 aaPredicted RBP23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 SLC25A24Q6NUK1 477 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 EIF4E3Q8N5X7 224 aaKnown RBP23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 OR10P1Q8NGE3 313 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 RPEQ96AT9 228 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 PINX1Q96BK5 328 aaKnown RBP23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 PARD6GQ9BYG4 376 aaPredicted RBP23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 SH3BGRL3Q9H299 93 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 SIRT7Q9NRC8 400 aa23.58■■□□□ 1.37
CTDNEP1-208ENST00000573600 TET2Q6N021 2002 aaPredicted RBP23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 PMS2P5A8MQ11 134 aa23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 NDUFS8O00217 210 aa23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 HOXA1P49639 335 aaPredicted RBP23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 OR8G2PQ6IF36 304 aa23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 SCGB1C1Q8TD33 95 aa23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 PIMREGQ9BSJ6 248 aa23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 UNKLQ9H9P5 680 aaKnown RBP23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 ZNF462Q96JM2 2506 aa23.57■■□□□ 1.36
CTDNEP1-208ENST00000573600 IGHV1-3A0A0C4DH29 117 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 LY6LH3BQJ8 138 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 LGALS7P47929 136 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 PRB3Q04118 309 aaPredicted RBP23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 ENY2Q9NPA8 101 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 PARP11Q9NR21 331 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 NUDT19A8MXV4 375 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 USF1P22415 310 aaPredicted RBP23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 OR2G3Q8NGZ4 309 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 FAM168AQ92567 244 aa23.56■■□□□ 1.36
CTDNEP1-208ENST00000573600 OR8U8P0C7N1 319 aa23.55■■□□□ 1.36
CTDNEP1-208ENST00000573600 HTR1DP28221 377 aa23.55■■□□□ 1.36
CTDNEP1-208ENST00000573600 PAX2Q02962 417 aa23.55■■□□□ 1.36
CTDNEP1-208ENST00000573600 OR5B3Q8NH48 314 aa23.55■■□□□ 1.36
CTDNEP1-208ENST00000573600 RBMXL1Q96E39 390 aaKnown RBP23.55■■□□□ 1.36
CTDNEP1-208ENST00000573600 USP9XQ93008 2570 aaPredicted RBP23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 IGHV2-70DA0A0C4DH43 119 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 C15orf62A8K5M9 175 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 UMAD1C9J7I0 102 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 FOXH1O75593 365 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 IFNA10P01566 189 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 CEACAM3P40198 252 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 VMA21Q3ZAQ7 101 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 PXDC1Q5TGL8 231 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 TMEM167AQ8TBQ9 72 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 DCHS2Q6V1P9 2916 aa23.54■■□□□ 1.36
CTDNEP1-208ENST00000573600 TRIM77I1YAP6 450 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 ATP5J2P56134 94 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 LCN2P80188 198 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 PRCDQ00LT1 54 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 LRRC75BQ2VPJ9 315 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 MOB3BQ86TA1 216 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 MARC2Q969Z3 335 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 TMEM147Q9BVK8 224 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 DPM3Q9P2X0 92 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 ODF3BA8MYP8 253 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 I3L521 148 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 IGLV2-23P01705 113 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 TPTE2P1Q5T6R2 138 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 TMEM182Q6ZP80 229 aaPredicted RBP23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 VMO1Q7Z5L0 202 aa23.53■■□□□ 1.36
CTDNEP1-208ENST00000573600 ARHGAP32A7KAX9 2087 aa23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 RPL8P62917 257 aaKnown RBP23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 HCP5Q6MZN7 132 aa23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 CLEC2AQ6UVW9 174 aa23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 Q6ZRG5 221 aa23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 C10orf105Q8TEF2 133 aa23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 MMP26Q9NRE1 261 aa23.52■■□□□ 1.36
CTDNEP1-208ENST00000573600 TEX50A0A1B0GTY4 177 aa23.51■■□□□ 1.35
CTDNEP1-208ENST00000573600 TEX46H3BTG2 121 aa23.51■■□□□ 1.35
CTDNEP1-208ENST00000573600 PRH1P02810 166 aa23.51■■□□□ 1.35
CTDNEP1-208ENST00000573600 RAB11AP62491 216 aa23.51■■□□□ 1.35
CTDNEP1-208ENST00000573600 THNSL2Q86YJ6 484 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms