RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 NR2C2APQ86WQ0 139 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 ST6GALNAC5Q9BVH7 336 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 ATG5Q9H1Y0 275 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 TECRQ9NZ01 308 aaKnown RBP11.64□□□□□ -0.55
NME3-211ENST00000568561 MLXQ9UH92 298 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 ZNF257Q9Y2Q1 563 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
NME3-211ENST00000568561 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 TMEM213A2RRL7 107 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 KBTBD11O94819 623 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 SCAF4O95104 1147 aaKnown RBP11.63□□□□□ -0.55
NME3-211ENST00000568561 REG1AP05451 166 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 CBLN1P23435 193 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 CRHBPP24387 322 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 SLC16A13Q7RTY0 426 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 PRSS48Q7RTY5 328 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 SLC25A42Q86VD7 318 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 TCTEX1D2Q8WW35 142 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 FANCD2OSQ96PS1 177 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 OR51E2Q9H255 320 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 SPATA2Q9UM82 520 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 PRELID3BQ9Y3B1 194 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 OR2W1Q9Y3N9 320 aa11.63□□□□□ -0.55
NME3-211ENST00000568561 TRAV1-2A0A0B4J238 106 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 METTL21EPA6NDL7 271 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 LGALS9O00182 355 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 CD36P16671 472 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 RAB3BP20337 219 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 MYL9P24844 172 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 BRWD1-AS2P59051 145 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 CDNFQ49AH0 187 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 ZNF57Q68EA5 555 aaPredicted RBP11.62□□□□□ -0.55
NME3-211ENST00000568561 BTNL8Q6UX41 500 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 SSX9Q7RTT3 188 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 UXS1Q8NBZ7 420 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 OR52B4Q8NGK2 314 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 OR4S2Q8NH73 311 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 TMEM167AQ8TBQ9 72 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 OR2A7Q96R45 310 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
NME3-211ENST00000568561 TMEM235A6NFC5 223 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 MFSD2BA6NFX1 497 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 ZNF735P0CB33 412 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 DTYMKP23919 212 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 RANBP1P43487 201 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 GPHB5Q86YW7 130 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 PUSL1Q8N0Z8 303 aaKnown RBP11.61□□□□□ -0.55
NME3-211ENST00000568561 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 SLC2A9Q9NRM0 540 aa11.61□□□□□ -0.55
NME3-211ENST00000568561 IGHV3-35A0A0C4DH35 117 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 CXorf65A6NEN9 183 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 A8MWP6 167 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 PSMB6P28072 239 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 EWSR1Q01844 656 aaKnown RBP eCLIP11.6□□□□□ -0.55
NME3-211ENST00000568561 EIF4EBP1Q13541 118 aaPredicted RBP11.6□□□□□ -0.55
NME3-211ENST00000568561 TBCEQ15813 527 aaPredicted RBP11.6□□□□□ -0.55
NME3-211ENST00000568561 TM4SF20Q53R12 229 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 FAM209BQ5JX69 171 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 C22orf42Q6IC83 251 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 VSTM2AQ8TAG5 236 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 NDUFB11Q9NX14 153 aa11.6□□□□□ -0.55
NME3-211ENST00000568561 CGB1A6NKQ9 187 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 TNFSF12O43508 249 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 SSX5O60225 188 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 LY6G6CO95867 125 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 PTHLHP12272 177 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 FAM106AQ4KMX7 169 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 MFSD4AQ8N468 514 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
NME3-211ENST00000568561 CENPOQ9BU64 300 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 DNAH10Q8IVF4 4471 aa11.59□□□□□ -0.55
NME3-211ENST00000568561 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 LOC102724200A0A096LPH7 203 aaPredicted RBP11.58□□□□□ -0.56
NME3-211ENST00000568561 A0A0J9YWU9 116 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 TRDV1A0A1B0GX56 115 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 CRYGCP07315 174 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 CTXN2P0C2S0 81 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 CTRB1P17538 263 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 GPR183P32249 361 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
NME3-211ENST00000568561 CTRB2Q6GPI1 263 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 CNIH2Q6PI25 160 aa11.58□□□□□ -0.56
NME3-211ENST00000568561 SLC22A5O76082 557 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 DHFRP00374 187 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 CLEC3BP05452 202 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 DEFA4P12838 97 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 HLA-GP17693 338 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 MAS1LP35410 378 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 GNG2P59768 71 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms