RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	USF1	P22415	310 aa	Predicted RBP	3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	PPIC	P45877	212 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	SUB1	P53999	127 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	TAS2R43	P59537	309 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	CKS1B	P61024	79 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	RND3	P61587	244 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	RPL38	P63173	70 aa	Known RBP	3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	BAX	Q07812	192 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	CD47	Q08722	323 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	PLCXD2	Q0VAA5	305 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	ECH1	Q13011	328 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF154	Q13106	437 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	CDK10	Q15131	360 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR2B11	Q5JQS5	317 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	C1orf194	Q5T5A4	169 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	TBPL2	Q6SJ96	375 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	APOOL	Q6UXV4	268 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	RDH10	Q8IZV5	341 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	GAPT	Q8N292	157 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR52R1	Q8NGF1	315 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR5J2	Q8NH18	312 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	MCFD2	Q8NI22	146 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	FAM57A	Q8TBR7	257 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	TWIST2	Q8WVJ9	160 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	ARPC1A	Q92747	370 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	PPCDC	Q96CD2	204 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	COL21A1	Q96P44	957 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	MARVELD1	Q9BSK0	173 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	C20orf27	Q9GZN8	174 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	DEFB127	Q9H1M4	99 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	FBXL15	Q9H469	300 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	VSIR	Q9H7M9	311 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	EHF	Q9NZC4	300 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	SPRR3	Q9UBC9	169 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	RAB22A	Q9UL26	194 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	POLR1D	Q9Y2S0	133 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	FAM215A	Q9Y5M1	114 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF780B	Q9Y6R6	833 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	ABCA12	Q86UK0	2595 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	POLE	Q07864	2286 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	DCHS2	Q6V1P9	2916 aa		3.14	□□□□□ -1.91
LRRC28-222	ENST00000561431	TACC2	O95359	2948 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	NCOA6	Q14686	2063 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	NBPF19	A0A087WUL8	3843 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	NCKAP5	O14513	1909 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	DOPEY2	Q9Y3R5	2298 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	RP1L1	Q8IWN7	2480 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A096LPI6	279 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	TRGV5	A0A0B4J1U4	118 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	CCDC160	A6NGH7	325 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR4C46	A6NHA9	309 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR5H1	A6NKK0	313 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	C11orf98	E9PRG8	122 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431		K7EMT4	169 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431		K7EQG2	157 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	UPK1A	O00322	258 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	FAAH	O00519	579 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	TP53I11	O14683	189 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ICOSLG	O75144	302 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	GADD45G	O95257	159 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	NUDT14	O95848	222 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	IGKV1D-16	P01601	117 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ARG1	P05089	322 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR5G3	P0C626	314 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ESD	P10768	282 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	CD99	P14209	185 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF25	P17030	456 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	CD34	P28906	385 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	S100A7	P31151	101 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	GZMM	P51124	257 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	NCBP2	P52298	156 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	HSPE1	P61604	102 aa	Known RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	CDK5	Q00535	292 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	PLGLB1	Q02325	96 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	TFF3	Q07654	80 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF616	Q08AN1	781 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF726P1	Q15940	193 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	MICA	Q29983	383 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR10K2	Q6IF99	312 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	TFAP2E	Q6VUC0	442 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ADAMTSL5	Q6ZMM2	481 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OAF	Q86UD1	273 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431		Q8N377	158 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ARRDC1	Q8N5I2	433 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR4D11	Q8NGI4	311 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR51S1	Q8NGJ8	323 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	NEIL3	Q8TAT5	605 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	TRUB1	Q8WWH5	349 aa	Known RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	GALM	Q96C23	342 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	PPP3R2	Q96LZ3	170 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	DOHH	Q9BU89	302 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	C1orf50	Q9BV19	199 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	CHST5	Q9GZS9	411 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	RNF167	Q9H6Y7	350 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	METTL17	Q9H7H0	456 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	ADGRL4	Q9HBW9	690 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	BOK	Q9UMX3	212 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	FIS1	Q9Y3D6	152 aa		3.13	□□□□□ -1.91

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