RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 UBQLN2Q9UHD9 624 aa9.12□□□□□ -0.95
SNX6-209ENST00000557265 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
SNX6-209ENST00000557265 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 A0A1B0GW64 132 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 DHFRP00374 187 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 CRYGCP07315 174 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 ZNF735P0CB33 412 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 GNB3P16520 340 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 PSMB6P28072 239 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 RPL30P62888 115 aaKnown RBP9.11□□□□□ -0.95
SNX6-209ENST00000557265 LIPKQ5VXJ0 399 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 TMEM91Q6ZNR0 172 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 KCTD9Q7L273 389 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 FBLIM1Q8WUP2 373 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 OR2A7Q96R45 310 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 C5orf66Q9H5L9 145 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
SNX6-209ENST00000557265 RAB22AQ9UL26 194 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 LSM2Q9Y333 95 aaKnown RBP9.11□□□□□ -0.95
SNX6-209ENST00000557265 PRELID3BQ9Y3B1 194 aa9.11□□□□□ -0.95
SNX6-209ENST00000557265 A0A075B6Q4 140 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 TRBV7-1A0A0A6YYK4 115 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 IGHV3-35A0A0C4DH35 117 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 TMEM272A0A1B0GTI8 110 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 MFSD2BA6NFX1 497 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 KBTBD11O94819 623 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 DEFA4P12838 97 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 RPL35AP18077 110 aaKnown RBP9.1□□□□□ -0.95
SNX6-209ENST00000557265 ARFRP1Q13795 201 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 ZNF645Q8N7E2 425 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 VSTM2AQ8TAG5 236 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 TMEM167AQ8TBQ9 72 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 SPAG8Q99932 426 aaPredicted RBP9.1□□□□□ -0.95
SNX6-209ENST00000557265 MRPS7Q9Y2R9 242 aaKnown RBP9.1□□□□□ -0.95
SNX6-209ENST00000557265 UFC1Q9Y3C8 167 aa9.1□□□□□ -0.95
SNX6-209ENST00000557265 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PTGES3LE9PB15 166 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 ARL6IP5O75915 188 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 REG1AP05451 166 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 HIST1H1BP16401 226 aaKnown RBP9.09□□□□□ -0.95
SNX6-209ENST00000557265 CTRB1P17538 263 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 GALP22466 123 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 GPR183P32249 361 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 MAS1LP35410 378 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 TALDO1P37837 337 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PSMD7P51665 324 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 RPS25P62851 125 aaKnown RBP9.09□□□□□ -0.95
SNX6-209ENST00000557265 PRR20EP86478 221 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PRR20CP86479 221 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PRR20DP86480 221 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PRR20BP86481 221 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PRR20AP86496 221 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 MED22Q15528 200 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 HES5Q5TA89 166 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 CTRB2Q6GPI1 263 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 PUSL1Q8N0Z8 303 aaKnown RBP9.09□□□□□ -0.95
SNX6-209ENST00000557265 PACRGLQ8N7B6 248 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 OR10R2Q8NGX6 335 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 UFD1Q92890 307 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 CXorf58Q96LI9 332 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 CENPOQ9BU64 300 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 KLK9Q9UKQ9 250 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 RBMX2Q9Y388 322 aaKnown RBP9.09□□□□□ -0.95
SNX6-209ENST00000557265 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
SNX6-209ENST00000557265 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 RAB27BO00194 218 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 MFNGO00587 321 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 TSPAN4O14817 238 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 S1PR2O95136 353 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 IGLV2-14P01704 120 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 MYOD1P15172 320 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 HIST1H1DP16402 221 aaKnown RBP9.08□□□□□ -0.96
SNX6-209ENST00000557265 CRHBPP24387 322 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 GADD45AP24522 165 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 CALRP27797 417 aaKnown RBP9.08□□□□□ -0.96
SNX6-209ENST00000557265 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
SNX6-209ENST00000557265 ELLP55199 621 aaPredicted RBP9.08□□□□□ -0.96
SNX6-209ENST00000557265 PLET1Q6UQ28 207 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 Q6ZS49 121 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 SSX9Q7RTT3 188 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 OR4S2Q8NH73 311 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 C8orf4Q9NR00 106 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 SPATA2Q9UM82 520 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 V9GY05 133 aa9.08□□□□□ -0.96
SNX6-209ENST00000557265 HLA-DQB1P01920 261 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 IFNA4P05014 189 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 HSMCR30P0CW71 290 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 RPA2P15927 270 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 CD36P16671 472 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 NFYAP23511 347 aaPredicted RBP9.07□□□□□ -0.96
SNX6-209ENST00000557265 RANBP1P43487 201 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 BRWD1-AS2P59051 145 aa9.07□□□□□ -0.96
SNX6-209ENST00000557265 NANOS2P60321 138 aaKnown RBP9.07□□□□□ -0.96
SNX6-209ENST00000557265 RPL8P62917 257 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms