RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 RNF2Q99496 336 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 S1PR3Q99500 378 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 RTL8AQ9BWD3 113 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 SSBP3Q9BWW4 388 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-203ENST00000547825 IL36RNQ9UBH0 155 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 A0A1W2PRD5 423 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 A0A1W2PRF3 423 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 A0A1W2PRM7 423 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 PMS2P1A4D2B8 440 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 DBX1A6NMT0 343 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 SYNGR1O43759 233 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 IGHV3-48P01763 117 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 CLPSP04118 112 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 CCL3P10147 92 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 SELEP16581 610 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 EPHA8P29322 1005 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-203ENST00000547825 RBM11P57052 281 aaKnown RBP4.64□□□□□ -1.67
LIMA1-203ENST00000547825 ZNF506Q5JVG8 444 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 Q5PR19 223 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 SSX8Q7RTT4 187 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 FGFRL1Q8N441 504 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 D2HGDHQ8N465 521 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 OR2V1Q8NHB1 315 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 C22orf15Q8WYQ4 148 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 RAB37Q96AX2 223 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 MOB3AQ96BX8 217 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 SPRY4Q9C004 299 aa4.64□□□□□ -1.67
LIMA1-203ENST00000547825 BOKQ9UMX3 212 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-203ENST00000547825 HELTA6NFD8 242 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 K7N7A8 449 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 TOX3O15405 576 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 TSPAN2O60636 221 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SRSF10O75494 262 aaKnown RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 PLAUP00749 431 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 PRB4P10163 310 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 BRS3P32247 399 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 CEBPDP49716 269 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 COMPP49747 757 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 NUTF2P61970 127 aaKnown RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 AESQ08117 197 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 OR8B8Q15620 311 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 IGFBP7Q16270 282 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 MIC13Q5XKP0 118 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 LEMD1Q68G75 181 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM211Q6ICI0 200 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 VWA1Q6PCB0 445 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 OR10S1Q8NGN2 331 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 H1FXQ92522 213 aaKnown RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 AJUBAQ96IF1 538 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 OR2J1Q9GZK6 312 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 GLRX2Q9NS18 164 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 DCAF16Q9NXF7 216 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 TAAR3PQ9P1P4 343 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 ARFGEF3Q5TH69 2177 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 TACC2O95359 2948 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SPG11Q96JI7 2443 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 COL6A6A6NMZ7 2263 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 ZG16O60844 167 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 OR5AL1P0C617 328 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 C1QTNF9P0C862 333 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 FOLR2P14207 255 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SRIP30626 198 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 PMELP40967 661 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SERF2P84101 59 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 PSG4Q00888 419 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 GUSBP11Q6P575 273 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 VKORC1L1Q8N0U8 176 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SCCPDHQ8NBX0 429 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 OR2T6Q8NHC8 308 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 FAM216AQ8WUB2 273 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 ADIPOR1Q96A54 375 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SDF2L1Q9HCN8 221 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 POLDIP2Q9Y2S7 368 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 WIPI2Q9Y4P8 454 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 A0A0J9YW62 118 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 A0A1B0GU03 582 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 SLC22A20A6NK97 555 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 IFNL4K9M1U5 179 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 KLK10O43240 276 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 KBTBD11O94819 623 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 GZMBP10144 247 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 CD99P14209 185 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 FOXA3P55318 350 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 ATP6V1FQ16864 119 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 WDR74Q6RFH5 385 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 DOLPP1Q86YN1 238 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 OR2Y1Q8NGV0 311 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 APOBEC3DQ96AK3 386 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-203ENST00000547825 USF3Q68DE3 2245 aa4.63□□□□□ -1.67
LIMA1-203ENST00000547825 WNK1Q9H4A3 2382 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 NCKAP5O14513 1909 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 TRBV6-7A0A0A0MS04 114 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 IGKV1D-13A0A0B4J2D9 117 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 A0A1W2PRX2 142 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 SERF1AO75920 110 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 NEURL1O76050 574 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 NAPSAO96009 420 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 IGKV1-13P0DP09 117 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 ORM2P19652 201 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 ATP5G3P48201 142 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms