RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MED27Q6P2C8 311 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 IGFL3Q6UXB1 125 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 IZUMO2Q6UXV1 221 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ARPINQ7Z6K5 226 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 EIF4E3Q8N5X7 224 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 DRAM1Q8N682 238 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF645Q8N7E2 425 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 Q8N7P7 452 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 OR2Y1Q8NGV0 311 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 WFDC5Q8TCV5 224 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 PHF10Q8WUB8 498 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 SFT2D1Q8WV19 159 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 BLNKQ8WV28 456 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ZHX1-C8orf76Q96EF9 292 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 SMIM8Q96KF7 97 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 HBEGFQ99075 208 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 KLF6Q99612 283 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 PITX2Q99697 317 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 DOK1Q99704 481 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 GGACTQ9BVM4 153 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ULBP3Q9BZM4 244 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 NXF2Q9GZY0 626 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 TRABDQ9H4I3 376 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RDH14Q9HBH5 336 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 SAR1AQ9NR31 198 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 C1orf109Q9NX04 203 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 DDIT4Q9NX09 232 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 COPZ2Q9P299 210 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 OR52A1Q9UKL2 312 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RAB26Q9ULW5 256 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 SLC22A13Q9Y226 551 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 DOCK10Q96BY6 2186 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 AKAP9Q99996 3911 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 IGKV1-27A0A075B6S5 117 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 A0A1B0GV72 72 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 H3BSA7 217 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 PSMD12O00232 456 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-217ENST00000541578 UGT2B11O75310 529 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 DHRS3O75911 302 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 HLA-DQA1P01909 254 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SERPINB10P48595 397 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 ERVS71-1P61550 626 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 GRB2P62993 217 aaKnown RBP2.77□□□□□ -1.97
SNHG1-217ENST00000541578 CD164Q04900 197 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SYCNQ0VAF6 134 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 BTN1A1Q13410 526 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SLC25A35Q3KQZ1 300 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 C6orf52Q5T4I8 152 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SAXO2Q658L1 398 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 DCUN1D2Q6PH85 259 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM205Q6UW68 189 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 TIFABQ6ZNK6 161 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SLC16A13Q7RTY0 426 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 ANGPTL5Q86XS5 388 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 BOD1L2Q8IYS8 172 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 LRRC18Q8N456 261 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 C12orf45Q8N5I9 185 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SPICQ8N5J4 248 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 PACRGLQ8N7B6 248 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 HGDQ93099 445 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 RBMXL1Q96E39 390 aaKnown RBP2.77□□□□□ -1.97
SNHG1-217ENST00000541578 NARS2Q96I59 477 aaKnown RBP2.77□□□□□ -1.97
SNHG1-217ENST00000541578 RNF157Q96PX1 679 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 NIPSNAP1Q9BPW8 284 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 NUDT9Q9BW91 350 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SAMD10Q9BYL1 202 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 MIXL1Q9H2W2 232 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 NMNAT1Q9HAN9 279 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF355PQ9NSJ1 428 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 RBM22Q9NW64 420 aaKnown RBP eCLIP2.77□□□□□ -1.971e-8■■■□□ 18.1
SNHG1-217ENST00000541578 MED9Q9NWA0 146 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 TAS2R9Q9NYW1 312 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 SMPXQ9UHP9 88 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 ABCA4P78363 2273 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 CACNA1CQ13936 2221 aa2.77□□□□□ -1.97
SNHG1-217ENST00000541578 CSMD1Q96PZ7 3565 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 A0A0U1RQV1 116 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM213A2RRL7 107 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 TSTD3H0UI37 97 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 KLRC4-KLRK1H3BQV0 150 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 CLDN34H7C241 214 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 K7EM74 188 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 K7EP13 123 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 BHLHE40O14503 412 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 GGCTO75223 188 aaKnown RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ENTPD6O75354 484 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 GCM2O75603 506 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 RAB36O95755 333 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 MAS1P04201 325 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 METTL15P1P0C7V9 234 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 IL7P13232 177 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 MUC1P15941 1255 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF823P16415 610 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 TAC1P20366 129 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ELK4P28324 431 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 CDC42P60953 191 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms